Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 0.0e+00 1103.6 642 100.0
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 4.4e-177 625.5 651 58.5
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 1.1e-175 620.9 652 58.7
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 3.6e-155 552.7 655 54.8
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 6.8e-154 548.5 656 54.4
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 8.8e-154 548.1 662 51.1
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 3.5e-150 536.2 665 53.2
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 2.3e-149 533.5 651 51.6
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 5.0e-141 505.8 660 50.9
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 2.1e-139 500.4 654 48.5
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 6.8e-138 495.4 707 47.1
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 1.5e-137 494.2 696 48.1
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.9e-136 490.0 678 50.0
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 4.1e-135 486.1 526 56.1
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 5.4e-135 485.7 664 49.5
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 4.6e-134 482.6 672 46.6
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 7.3e-132 475.3 683 49.5
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 6.8e-130 468.8 641 48.5
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 2.0e-129 467.2 652 47.9
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 2.0e-129 467.2 661 48.1
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 4.1e-127 459.5 690 46.7
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 5.4e-127 459.1 684 49.1
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 6.0e-126 455.7 654 46.8
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 2.3e-125 453.8 677 48.0
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 2.3e-125 453.8 671 45.6
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 2.5e-124 450.3 550 55.3
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 9.5e-124 448.4 580 48.4
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 1.1e-122 444.9 654 49.2
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 1.4e-122 444.5 692 46.2
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.8e-122 444.1 652 46.5
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 5.8e-121 439.1 662 47.1
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 7.6e-121 438.7 653 49.9
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 2.2e-120 437.2 692 49.1
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 2.4e-119 433.7 697 45.1
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 4.1e-119 433.0 654 48.9
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.6e-118 431.0 640 46.1
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 2.7e-118 430.3 668 49.3
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 3.5e-118 429.9 598 47.3
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 1.1e-114 418.3 675 44.0
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 1.4e-114 417.9 654 47.4
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 4.0e-114 416.4 682 44.0
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 2.0e-113 414.1 686 44.0
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 1.3e-112 411.4 675 46.4
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 1.3e-112 411.4 652 46.0
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 8.4e-112 408.7 650 44.8
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 3.2e-111 406.8 667 46.2
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 1.3e-109 401.4 680 42.9
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 1.3e-109 401.4 682 45.3
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 1.3e-109 401.4 658 44.4
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 1.7e-109 401.0 694 43.4
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 3.0e-109 400.2 666 45.0
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 1.1e-108 398.3 625 45.6
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.5e-108 397.9 656 46.5
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.4e-106 391.3 670 43.3
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 6.9e-106 389.0 698 41.8
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 3.4e-105 386.7 654 46.2
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 4.5e-105 386.3 653 46.1
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 7.6e-105 385.6 476 51.3
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 2.2e-104 384.0 684 43.1
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 2.9e-104 383.6 653 45.9
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 1.4e-103 381.3 623 44.1
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 5.4e-103 379.4 708 42.8
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 5.4e-103 379.4 652 45.6
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 9.3e-103 378.6 701 41.1
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 2.1e-102 377.5 681 42.3
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 3.5e-102 376.7 657 47.6
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 7.9e-102 375.6 650 42.6
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 1.0e-101 375.2 665 45.1
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.9e-101 373.2 659 45.8
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 9.6e-100 368.6 582 48.3
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.3e-99 368.2 526 51.9
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 4.0e-98 363.2 664 45.8
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 5.3e-98 362.8 721 42.2
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 2.6e-97 360.5 646 44.9
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 4.2e-95 353.2 658 44.2
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 7.9e-94 349.0 642 42.5
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.0e-93 348.6 568 44.2
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 3.0e-93 347.1 676 43.3
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 1.9e-92 344.4 658 43.0
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 5.6e-92 342.8 668 42.8
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 2.1e-91 340.9 666 44.0
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 2.8e-91 340.5 728 39.0
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 2.4e-90 337.4 465 48.8
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 9.0e-90 335.5 706 41.5
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 9.0e-90 335.5 561 43.1
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.0e-89 334.3 643 45.4
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 2.0e-89 334.3 648 40.6
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 1.9e-87 327.8 699 40.3
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.2e-87 327.0 646 43.3
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 7.1e-87 325.9 674 37.5
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 1.0e-85 322.0 645 41.4
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.0e-85 320.5 680 38.4
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.9e-85 320.1 682 38.9
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 1.8e-82 311.2 336 56.8
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 5.3e-82 309.7 658 41.3
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 2.6e-81 307.4 560 44.3
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 7.6e-81 305.8 666 39.9
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 1.7e-80 304.7 658 38.1
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 3.2e-79 300.4 431 47.8
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 6.5e-72 276.2 421 46.6
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 2.3e-69 267.7 622 37.0
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 8.8e-69 265.8 582 42.1
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 2.0e-68 264.6 674 34.0
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 2.5e-63 247.7 628 36.1
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.2e-63 247.3 484 43.2
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 7.2e-63 246.1 627 36.0
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 3.6e-62 243.8 640 35.5
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 3.6e-62 243.8 640 38.1
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 8.0e-62 242.7 627 35.7
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 1.0e-61 242.3 631 36.0
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 2.3e-53 214.5 271 49.1
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.2e-48 198.0 334 44.3
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 5.0e-48 196.8 572 35.3
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 1.8e-45 188.3 184 59.2
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 7.0e-42 176.4 326 42.3
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 2.0e-41 174.9 577 34.1
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 2.0e-41 174.9 374 40.4
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 2.6e-36 157.9 680 30.7
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 9.2e-34 149.4 603 29.9
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 6.1e-30 136.7 533 29.5
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 1.1e-26 125.9 131 53.4
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 4.6e-25 120.6 230 45.7
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 3.3e-23 114.4 296 37.2
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 3.7e-19 100.9 161 44.1
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 5.4e-18 97.1 594 26.3
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 1.6e-17 95.5 176 40.9
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.7e-16 92.0 102 61.8
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 3.0e-16 91.3 557 26.0
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.0e-16 91.3 155 40.6
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.5e-15 89.0 101 52.5
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 4.3e-15 87.4 101 52.5
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 4.7e-14 84.0 184 42.4
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 1.1e-13 82.8 132 48.5


User provided reference genes

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