Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.1e-190 669.8 360 100.0
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 6.6e-106 388.3 349 65.6
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 6.8e-95 351.7 360 58.1
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.5e-94 350.5 362 56.9
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 4.6e-91 339.0 347 57.6
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 4.6e-91 339.0 357 58.3
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 7.8e-91 338.2 380 54.5
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 3.0e-90 336.3 363 57.3
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 5.1e-90 335.5 362 54.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.6e-89 332.0 380 54.2
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.6e-88 330.5 380 53.9
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 2.1e-88 330.1 359 56.8
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 6.2e-88 328.6 353 53.8
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.1e-87 326.2 360 55.8
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 4.0e-87 325.9 360 55.6
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 4.0e-87 325.9 376 53.2
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 5.2e-87 325.5 354 54.0
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 6.8e-87 325.1 360 54.7
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 4.4e-86 322.4 361 54.3
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 5.8e-86 322.0 381 52.8
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 3.7e-85 319.3 377 51.7
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 3.7e-85 319.3 358 54.7
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 4.9e-85 318.9 354 52.5
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 8.4e-85 318.2 364 54.7
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 3.2e-84 316.2 363 52.3
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 9.2e-84 314.7 373 49.9
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 9.2e-84 314.7 353 53.3
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.1e-83 313.5 367 52.3
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.5e-83 312.8 363 52.1
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.3e-82 310.8 369 52.3
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 3.9e-82 309.3 399 48.9
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.1e-82 308.9 349 54.2
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 5.1e-82 308.9 379 50.1
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 8.6e-82 308.1 357 54.9
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.1e-81 307.8 382 50.8
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.1e-81 307.8 363 50.1
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.5e-81 307.4 369 49.9
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 4.3e-81 305.8 359 51.8
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 4.7e-80 302.4 358 51.7
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.1e-79 301.2 394 49.2
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.1e-79 301.2 368 52.7
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 1.4e-79 300.8 377 49.9
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 2.4e-79 300.1 361 50.4
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 2.4e-79 300.1 350 51.7
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 3.1e-79 299.7 396 49.2
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 5.2e-79 298.9 374 48.7
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.2e-78 297.7 382 49.0
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 2.0e-78 297.0 357 51.8
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 2.6e-78 296.6 380 50.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 3.4e-78 296.2 367 50.4
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 7.6e-78 295.0 361 50.1
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 7.6e-78 295.0 367 49.9
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 3.8e-77 292.7 364 48.1
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.2e-76 289.3 357 49.6
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 4.2e-76 289.3 357 49.6
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 4.2e-76 289.3 357 49.6
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 9.3e-76 288.1 368 48.6
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 9.3e-76 288.1 370 47.6
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 1.6e-75 287.3 368 50.3
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 2.1e-75 287.0 404 45.8
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 2.7e-75 286.6 356 49.2
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 3.5e-75 286.2 369 48.2
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 6.0e-75 285.4 343 50.4
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 7.8e-75 285.0 402 46.3
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.1e-73 281.2 448 43.5
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.9e-73 280.4 373 50.1
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 5.6e-73 278.9 396 47.7
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 3.1e-71 273.1 279 54.1
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.2e-70 271.2 361 47.9
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.3e-69 267.7 393 43.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 4.9e-69 265.8 359 46.2
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 1.9e-68 263.8 358 47.5
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 9.3e-68 261.5 279 52.7
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 6.6e-66 255.4 230 60.0
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.3e-64 251.1 237 59.9
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 2.6e-62 243.4 362 44.5
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.5e-62 242.7 368 45.4
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.8e-61 239.6 385 41.6
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 1.9e-60 237.3 378 45.0
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 4.6e-59 232.6 245 53.9
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 7.9e-59 231.9 346 44.5
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 5.6e-57 225.7 358 44.7
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 9.6e-57 224.9 233 55.8
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 6.9e-55 218.8 267 48.3
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 7.6e-54 215.3 464 38.8
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.7e-53 214.2 256 50.4
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 2.2e-53 213.8 330 43.9
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.4e-52 211.1 251 53.8
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.9e-52 210.7 344 41.9
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 3.2e-52 209.9 222 55.4
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 3.2e-52 209.9 231 52.4
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 2.7e-51 206.8 262 49.6
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 8.7e-50 201.8 268 46.6
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 4.3e-49 199.5 256 49.2
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 1.1e-47 194.9 272 47.4
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 1.8e-47 194.1 235 48.9
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 9.0e-47 191.8 148 67.6
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.2e-46 191.4 248 46.4
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 3.8e-45 186.4 273 46.2
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 6.5e-45 185.7 230 48.7
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 3.2e-44 183.3 299 41.1
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 2.5e-41 173.7 225 42.7
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 4.8e-40 169.5 393 34.4
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 8.2e-40 168.7 379 37.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 2.2e-37 160.6 232 43.5
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.9e-37 160.2 276 41.7
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.5e-33 147.1 319 35.4
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 2.2e-29 134.0 142 53.5
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.9e-28 131.0 207 43.5
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 7.2e-28 129.0 150 52.7
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 7.2e-28 129.0 150 52.7
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 9.1e-23 112.1 254 36.6
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 1.6e-22 111.3 91 64.8
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.5e-22 109.8 94 62.8
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 4.5e-22 109.8 192 43.8
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.8e-18 97.8 186 39.2
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 8.8e-18 95.5 228 33.3
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 7.5e-17 92.4 65 70.8
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 3.1e-15 87.0 122 42.6
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 2.2e-13 80.9 62 67.7
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.9e-12 77.8 91 48.4
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.0e-10 70.5 92 48.9
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.1e-07 62.0 75 50.7


User provided reference genes

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