Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.4e-251 872.5 439 100.0
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 8.0e-122 441.4 419 56.1
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 6.6e-108 395.2 385 54.5
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 4.0e-105 386.0 420 52.1
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.1e-102 375.9 437 48.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 2.0e-101 373.6 419 50.1
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 3.9e-100 369.4 383 54.3
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 6.6e-100 368.6 363 54.3
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 8.0e-98 361.7 383 53.3
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 3.1e-97 359.8 358 55.6
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 5.2e-97 359.0 424 49.1
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 6.8e-97 358.6 354 54.5
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 3.4e-96 356.3 394 51.8
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 4.4e-96 355.9 360 54.7
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 1.7e-95 354.0 422 46.7
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 1.1e-94 351.3 371 52.8
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 3.2e-94 349.7 363 52.6
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 9.2e-94 348.2 353 54.4
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.2e-93 347.8 374 53.2
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.0e-93 345.5 349 54.2
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.0e-92 344.7 407 49.1
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 1.7e-92 344.0 408 49.3
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.3e-92 343.6 406 48.5
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 3.0e-92 343.2 363 51.0
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 3.9e-92 342.8 423 47.0
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 6.6e-92 342.0 401 48.4
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 8.6e-92 341.7 415 48.0
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 1.1e-91 341.3 372 49.7
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 2.5e-91 340.1 390 49.2
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 7.3e-91 338.6 371 50.1
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 9.5e-91 338.2 408 49.0
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 9.5e-91 338.2 364 50.8
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 4.7e-90 335.9 363 51.2
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 4.7e-90 335.9 371 50.9
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 4.7e-90 335.9 373 50.1
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 4.7e-90 335.9 373 50.1
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.4e-89 334.3 355 51.0
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.8e-89 334.0 364 48.9
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.8e-89 334.0 370 50.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.8e-89 334.0 370 50.5
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 2.6e-88 330.1 359 49.6
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 3.4e-88 329.7 359 52.6
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 4.4e-88 329.3 364 48.4
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.3e-87 327.8 367 49.6
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.4e-87 325.5 401 46.9
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 8.3e-87 325.1 380 49.5
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 1.1e-86 324.7 376 48.4
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 9.2e-86 321.6 380 48.2
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.6e-85 320.9 367 49.9
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 3.5e-85 319.7 385 47.5
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 7.8e-85 318.5 416 45.9
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 1.3e-84 317.8 367 49.0
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 3.0e-84 316.6 369 48.2
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.1e-83 314.7 325 53.5
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.9e-83 313.9 363 49.0
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 5.6e-83 312.4 324 53.1
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 7.3e-83 312.0 364 48.9
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 9.5e-83 311.6 410 44.4
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 1.6e-82 310.8 369 47.4
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.1e-82 310.5 368 45.9
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 3.6e-82 309.7 365 47.4
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 4.7e-82 309.3 363 48.2
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 3.1e-81 306.6 363 47.9
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 6.8e-81 305.4 369 46.9
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.5e-80 304.3 370 47.3
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 4.4e-80 302.8 388 46.9
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 4.4e-80 302.8 390 47.9
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 4.4e-80 302.8 388 46.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 5.8e-80 302.4 373 50.4
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 7.6e-80 302.0 367 48.2
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 2.2e-79 300.4 390 47.9
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 2.9e-79 300.1 374 50.3
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 4.9e-79 299.3 392 48.0
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 4.9e-79 299.3 370 46.2
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.4e-78 297.7 361 48.5
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 2.4e-78 297.0 363 47.4
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 1.6e-77 294.3 368 45.4
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.3e-76 291.2 363 46.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 6.6e-76 288.9 343 47.5
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 1.1e-75 288.1 371 48.0
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 1.1e-75 288.1 316 52.5
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.5e-75 287.7 323 49.2
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 1.5e-75 287.7 361 47.4
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.5e-75 287.0 354 49.4
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 5.6e-75 285.8 386 47.2
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 7.3e-75 285.4 366 47.5
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.1e-74 283.9 369 48.2
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 1.5e-72 277.7 395 44.1
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 9.9e-72 275.0 354 45.8
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 8.7e-68 261.9 406 39.2
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.1e-65 253.4 369 43.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.1e-62 245.0 303 49.8
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.0e-60 238.4 309 50.2
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 1.0e-60 238.4 301 48.5
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 3.0e-60 236.9 364 40.9
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 5.1e-60 236.1 378 41.8
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 1.3e-58 231.5 268 47.0
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 6.2e-58 229.2 239 54.8
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.6e-51 206.1 235 52.8
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.6e-51 206.1 235 52.8
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.0e-47 195.3 278 41.0
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 1.1e-41 175.3 329 37.1
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 2.1e-37 161.0 235 46.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 9.0e-33 145.6 166 48.8
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-29 134.4 126 54.0
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-29 134.4 126 54.0
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.3e-28 131.0 123 61.8
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 8.8e-28 129.0 344 29.7
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 2.2e-26 124.4 179 44.7
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 2.4e-25 120.9 221 40.7
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.0e-24 117.9 234 37.2
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 7.7e-24 115.9 115 52.2
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 1.0e-23 115.5 314 30.3
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 2.9e-23 114.0 160 45.0
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 5.5e-22 109.8 329 31.3
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 3.6e-21 107.1 131 45.0
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 2.4e-09 67.8 326 24.5
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 1.5e-06 58.5 63 57.1
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 2.5e-06 57.8 154 31.8


User provided reference genes

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