Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00377 Aquilegia oxysepala HOM05D007340 ORTHO05D008979 9.7e-110 401.7 201 100.0
TAR633G1855 Trochodendron aralioides HOM05D007340 ORTHO05D008979 2.9e-45 187.6 200 50.0
Haze_00999 Corylus avellana HOM05D007340 ORTHO05D008979 7.9e-35 152.9 201 41.3
Dinv44465 Davidia involucrata HOM05D007340 ORTHO05D008979 1.3e-34 152.1 202 41.6
Cfa015550 Carpinus fangiana HOM05D007340 ORTHO05D008979 1.8e-34 151.8 201 41.3
CiPaw.01G157600 Carya illinoinensis HOM05D007340 ORTHO05D008979 5.1e-34 150.2 201 43.8
Hma1.2p1_0511F.1_g169170 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 3.3e-33 147.5 193 39.4
PSO170G6018 Papaver somniferum HOM05D007340 ORTHO05D008979 3.3e-33 147.5 141 49.6
Hma1.2p1_2025F.1_g311460 Hydrangea macrophylla HOM05D007340 ORTHO05D008979 5.6e-33 146.7 205 39.5
Atru.chr4.2678 Acer truncatum HOM05D007340 ORTHO05D008979 9.6e-33 146.0 144 48.6
Atru.chr4.2685 Acer truncatum HOM05D007340 ORTHO05D008979 9.6e-33 146.0 144 48.6
CSS0042730 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 9.6e-33 146.0 183 42.1
COL.COLO4_13983 Corchorus olitorius HOM05D007340 ORTHO05D008979 1.3e-32 145.6 203 41.9
Sed0013632 Sechium edule HOM05D007340 ORTHO05D008979 6.2e-32 143.3 184 40.8
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.4e-31 142.1 146 45.9
Ciclev10007051m.g Citrus clementina HOM05D007340 ORTHO05D008979 2.6e-30 137.9 146 46.6
Manes.03G186900 Manihot esculenta HOM05D007340 ORTHO05D008979 9.9e-30 136.0 202 36.6
FvH4_4g14110 Fragaria vesca HOM05D007340 ORTHO05D008979 3.8e-29 134.0 201 37.8
QL06p005970 Quercus lobata HOM05D007340 ORTHO05D008979 4.9e-29 133.7 201 41.8
vmacro17996 Vaccinium macrocarpon HOM05D007340 ORTHO05D008979 4.9e-29 133.7 142 46.5
GSVIVG01017865001 Vitis vinifera HOM05D007340 ORTHO05D008979 4.9e-29 133.7 198 36.9
Ca_09841_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 6.4e-29 133.3 141 46.1
Cc03_g02890 Coffea canephora HOM05D007340 ORTHO05D008979 8.4e-29 132.9 210 36.2
Gohir.A09G060400 Gossypium hirsutum HOM05D001150 ORTHO05D008979 1.1e-28 132.5 204 40.7
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 1.4e-28 132.1 176 39.2
ClCG05G001120 Citrullus lanatus HOM05D007340 ORTHO05D008979 1.9e-28 131.7 196 36.7
MELO3C006065.2 Cucumis melo HOM05D007340 ORTHO05D008979 1.9e-28 131.7 193 35.8
Gorai.006G074200 Gossypium raimondii HOM05D001150 ORTHO05D008979 1.9e-28 131.7 204 39.7
Cpa.g.sc16.57 Carica papaya HOM05D007340 ORTHO05D008979 3.2e-28 131.0 203 36.0
PGSC0003DMG400004352 Solanum tuberosum HOM05D007340 ORTHO05D008979 3.2e-28 131.0 176 38.1
FAN12G4271 Fragaria x ananassa HOM05D007340 ORTHO05D008979 4.2e-28 130.6 201 36.8
Gohir.D09G059500 Gossypium hirsutum HOM05D001150 ORTHO05D008979 9.3e-28 129.4 204 39.7
Sc19g0004680 Simmondsia chinensis HOM05D007340 ORTHO05D008979 9.3e-28 129.4 201 36.8
Solyc01g080310.4 Solanum lycopersicum HOM05D007340 ORTHO05D008979 9.3e-28 129.4 203 36.0
CAN.G522.11 Capsicum annuum HOM05D007340 ORTHO05D008979 1.2e-27 129.0 145 42.1
Sopen01g032100 Solanum pennellii HOM05D007340 ORTHO05D008979 1.2e-27 129.0 176 38.1
RcHm_v2.0_Chr4g0419121 Rosa chinensis HOM05D007340 ORTHO05D008979 2.1e-27 128.3 201 38.8
Lalb_Chr15g0087231 Lupinus albus HOM05D007340 ORTHO05D008979 2.7e-27 127.9 139 43.2
Prupe.3G113000 Prunus persica HOM05D007340 ORTHO05D008979 4.6e-27 127.1 201 36.3
CANSAT78G0497 Cannabis sativa HOM05D007340 ORTHO05D008979 6.0e-27 126.7 160 43.1
Duzib151G0496 Durio zibethinus HOM05D007340 ORTHO05D008979 6.0e-27 126.7 202 38.1
CsaV3_3G008450 Cucumis sativus L. HOM05D007340 ORTHO05D008979 1.0e-26 125.9 193 34.7
Rhsim04G0212000 Rhododendron simsii HOM05D001150 ORTHO05D000998 1.0e-26 125.9 150 42.7
arahy.Tifrunner.gnm1.ann1.PE1C4R Arachis hypogaea HOM05D007340 ORTHO05D008979 1.8e-26 125.2 175 38.3
TPR.G14140 Trifolium pratense HOM05D007340 ORTHO05D008979 3.0e-26 124.4 146 41.8
Carub.0006s1725 Capsella rubella HOM05D007340 ORTHO05D008979 3.9e-26 124.0 201 34.8
Ca_06378_v3 Cicer arietinum L. HOM05D007340 ORTHO05D008979 3.9e-26 124.0 189 35.4
Lj4P768T34 Lonicera japonica HOM05D007340 ORTHO05D008979 5.1e-26 123.6 164 38.4
Thecc.04G270900 Theobroma cacao HOM05D007340 ORTHO05D008979 5.1e-26 123.6 209 37.3
Medtr5g094770 Medicago truncatula HOM05D007340 ORTHO05D008979 6.7e-26 123.2 147 42.9
AUR62010965 Chenopodium quinoa HOM05D007340 ORTHO05D008979 1.1e-25 122.5 139 44.6
MD02G1277500 Malus domestica HOM05D007340 ORTHO05D008979 1.5e-25 122.1 202 36.6
AL6G30300 Arabidopsis lyrata HOM05D007340 ORTHO05D008979 5.6e-25 120.2 201 35.3
AUR62021475 Chenopodium quinoa HOM05D007340 ORTHO05D008979 9.6e-25 119.4 146 41.8
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 9.6e-25 119.4 178 36.5
TPR.G28181 Trifolium pratense HOM05D007340 ORTHO05D008979 2.1e-24 118.2 146 39.7
Oeu021055.1 Olea europaea HOM05D007340 ORTHO05D008979 2.8e-24 117.9 138 39.9
AT5G18950 Arabidopsis thaliana HOM05D007340 ORTHO05D008979 3.7e-24 117.5 201 35.3
HanXRQChr10g0314401 Helianthus annuus HOM05D007340 ORTHO05D008979 3.7e-24 117.5 150 38.7
THA.LOC104827130 Tarenaya hassleriana HOM05D007340 ORTHO05D008979 3.7e-24 117.5 202 34.7
Phvul.003G036500 Phaseolus vulgaris HOM05D007340 ORTHO05D008979 4.8e-24 117.1 135 43.0
Psat7g256640 Pisum sativum HOM05D007340 ORTHO05D008979 6.2e-24 116.7 122 45.9
TWI73G0639 Tripterygium wilfordii HOM05D007340 ORTHO05D008979 6.2e-24 116.7 139 42.4
Lsat_1_v5_gn_5_93381 Lactuca sativa HOM05D007340 ORTHO05D008979 8.2e-24 116.3 146 35.6
EL10Ac8g18451 Beta vulgaris HOM05D007340 ORTHO05D008979 1.1e-23 115.9 144 43.1
PGR065G0011 Punica granatum HOM05D007340 ORTHO05D008979 2.4e-23 114.8 137 42.3
CARHR194060 Cardamine hirsuta HOM05D007340 ORTHO05D008979 4.0e-23 114.0 169 37.3
SHI00355 Sapria himalayana HOM05D007340 ORTHO05D008979 4.0e-23 114.0 140 40.7
HanXRQChr17g0539051 Helianthus annuus HOM05D007340 ORTHO05D008979 9.0e-23 112.8 140 35.0
Eucgr.C04132 Eucalyptus grandis HOM05D007340 ORTHO05D008979 1.2e-22 112.5 204 35.3
FAN17G2541 Fragaria x ananassa HOM05D007340 ORTHO05D008979 1.2e-22 112.5 201 32.8
Psat2g009000 Pisum sativum HOM05D007340 ORTHO05D008979 1.5e-22 112.1 118 46.6
Sp6g25440 Schrenkiella parvula HOM05D007340 ORTHO05D008979 2.6e-22 111.3 202 32.7
BcaB08g36633 Brassica carinata HOM05D007340 ORTHO05D008979 3.4e-22 110.9 206 35.4
Eucgr.C03952 Eucalyptus grandis HOM05D007340 ORTHO05D008979 3.4e-22 110.9 204 35.3
Lj5g0026289 Lotus japonicus HOM05D007340 ORTHO05D008979 4.5e-22 110.5 140 40.0
A10p20720 Brassica napus HOM05D007340 ORTHO05D008979 1.7e-21 108.6 207 35.7
BraA10t44135Z Brassica rapa HOM05D007340 ORTHO05D008979 2.2e-21 108.2 204 35.3
BcaC04g18636 Brassica carinata HOM05D007340 ORTHO05D008979 4.9e-21 107.1 145 41.4
CDE04G1227 Ceratophyllum demersum HOM05D007340 ORTHO05D008979 4.9e-21 107.1 147 36.1
Migut.G00250 Erythranthe guttata HOM05D007340 ORTHO05D008979 2.5e-20 104.8 140 40.0
BolC9t58627H Brassica oleracea HOM05D007340 ORTHO05D008979 7.1e-20 103.2 205 33.7
C09p57580 Brassica napus HOM05D007340 ORTHO05D008979 4.6e-19 100.5 205 33.2
Glyma.07G161500 Glycine max HOM05D007340 ORTHO05D008979 2.5e-17 94.7 164 32.9
SalBow2G1987 Salvia bowleyana HOM05D007340 ORTHO05D008979 4.3e-17 94.0 137 35.0
CSS0023925 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 1.4e-15 89.0 183 31.7
ATR0582G031 Amborella trichopoda HOM05D007340 ORTHO05D008979 4.1e-15 87.4 105 37.1
TPR.G15743 Trifolium pratense HOM05D007340 ORTHO05D008979 5.3e-15 87.0 99 43.4
VMungo1215G3235 Vigna mungo HOM05D007340 ORTHO05D008979 6.9e-15 86.7 81 48.1
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 5.0e-13 80.5 144 31.9
BcaB01g05283 Brassica carinata HOM05D007340 ORTHO05D008979 8.2e-08 63.2 78 43.6
CSS0014652 Camellia sinensis var. sinensis HOM05D007340 ORTHO05D008979 8.2e-08 63.2 58 44.8
MD00G1180200 Malus domestica HOM05D007956 ORTHO05D010152 5.3e-07 60.5 158 29.7
PSO339G1208 Papaver somniferum HOM05D005973 ORTHO05D007285 5.3e-07 60.5 146 24.0
PSO384G2338 Papaver somniferum HOM05D005973 ORTHO05D007285 6.9e-07 60.1 146 24.0


User provided reference genes

Program Settings