Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 8.8e-150 533.5 250 100.0
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 3.3e-80 302.4 229 62.9
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 5.6e-80 301.6 218 66.1
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 7.3e-80 301.2 229 62.0
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 2.4e-78 296.2 233 61.8
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 4.0e-78 295.4 230 62.2
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.2e-77 293.9 231 60.2
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 4.5e-77 292.0 220 63.2
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 9.9e-77 290.8 230 61.3
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.4e-75 286.2 206 64.1
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 3.2e-75 285.8 221 60.6
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 5.4e-75 285.0 230 60.0
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 9.3e-75 284.3 230 61.7
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 5.1e-73 278.5 233 58.8
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 5.1e-73 278.5 233 58.8
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 5.1e-73 278.5 230 58.7
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 8.7e-73 277.7 220 60.9
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.5e-72 276.9 204 63.7
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.5e-72 276.9 231 56.7
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.5e-72 276.9 255 54.9
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.9e-72 276.6 231 59.3
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.3e-72 275.8 231 59.7
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 3.3e-72 275.8 231 57.1
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.3e-72 275.8 230 56.5
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 4.3e-72 275.4 231 59.3
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 5.6e-72 275.0 244 57.0
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 5.6e-72 275.0 200 65.0
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 9.6e-72 274.2 230 54.8
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 9.6e-72 274.2 229 59.4
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-71 273.9 236 62.3
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 2.1e-71 273.1 196 64.8
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.1e-71 273.1 196 65.3
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.1e-71 273.1 236 62.3
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 4.8e-71 271.9 214 58.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 4.8e-71 271.9 237 57.8
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 6.2e-71 271.6 206 60.2
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 6.2e-71 271.6 227 55.1
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 8.1e-71 271.2 233 54.9
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.4e-70 269.6 227 54.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.4e-70 269.6 185 68.1
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.1e-70 269.2 208 60.6
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 5.3e-70 268.5 229 55.9
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 6.9e-70 268.1 201 60.7
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 6.9e-70 268.1 232 56.9
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.9e-70 268.1 191 61.3
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 6.9e-70 268.1 230 55.7
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 9.0e-70 267.7 230 59.1
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.5e-69 266.9 207 61.8
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 2.6e-69 266.2 217 59.9
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 3.4e-69 265.8 258 52.7
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 4.5e-69 265.4 201 62.7
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 7.6e-69 264.6 227 58.6
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 7.6e-69 264.6 257 49.8
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.7e-68 263.5 217 56.2
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.9e-68 262.7 255 53.7
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 4.9e-68 261.9 204 59.8
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 6.4e-68 261.5 203 60.6
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 8.4e-68 261.2 216 57.9
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.4e-67 260.4 230 53.5
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.4e-67 260.4 183 65.6
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.9e-67 260.0 235 56.2
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.9e-67 260.0 237 54.4
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.9e-67 260.0 180 65.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.9e-67 260.0 227 55.1
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 1.9e-67 260.0 195 62.1
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 3.2e-67 259.2 191 62.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 7.1e-67 258.1 233 56.7
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.2e-66 257.3 237 53.6
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.6e-66 256.9 192 65.1
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.0e-65 254.2 237 53.6
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.3e-65 253.8 237 55.3
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.3e-65 253.8 194 62.9
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.3e-65 253.8 208 61.1
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 2.3e-65 253.1 238 54.2
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 6.7e-65 251.5 235 54.5
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.1e-64 250.8 263 49.4
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.5e-64 250.4 239 54.8
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.5e-64 249.6 235 53.2
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 4.3e-64 248.8 225 55.6
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 4.3e-64 248.8 225 55.6
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 4.3e-64 248.8 205 60.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 5.6e-64 248.4 228 56.6
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 7.4e-64 248.1 227 56.4
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 7.4e-64 248.1 201 58.7
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 7.4e-64 248.1 201 60.7
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 9.6e-64 247.7 191 61.3
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 9.6e-64 247.7 190 62.6
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.3e-63 247.3 201 61.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.3e-63 247.3 170 67.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 6.2e-63 245.0 186 59.7
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.1e-62 242.7 213 54.0
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 4.0e-62 242.3 192 60.4
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 6.9e-62 241.5 233 51.5
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 1.2e-61 240.7 236 54.7
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 4.5e-61 238.8 189 59.3
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.3e-60 237.3 146 73.3
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.7e-60 236.9 169 63.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.9e-60 236.1 221 53.8
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.9e-60 236.1 231 52.4
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.4e-59 233.8 175 62.3
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.4e-59 233.8 175 62.3
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-58 230.3 138 76.1
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-58 230.3 138 76.1
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.6e-58 230.3 138 76.1
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.1e-58 229.9 208 57.7
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 2.7e-58 229.6 138 75.4
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.5e-56 223.8 210 55.2
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.5e-56 223.8 210 55.2
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.1e-54 217.6 165 61.2
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 3.4e-53 212.6 160 63.1
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.9e-52 209.5 168 55.4
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.4e-51 207.2 148 61.5
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.8e-39 166.4 124 59.7
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 2.4e-38 163.3 223 44.8
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.1e-35 154.5 129 55.8
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.1e-34 150.2 121 57.0
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.5e-32 144.1 92 68.5
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 4.8e-31 139.0 87 63.2
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 7.2e-27 125.2 102 51.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.9e-12 76.6 162 33.3
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 2.2e-07 60.5 113 37.2


User provided reference genes

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