Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 1.5e-297 1025.4 514 100.0
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 8.0e-206 720.7 509 71.9
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 6.8e-197 691.0 509 68.4
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 4.0e-189 665.2 506 66.8
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 2.8e-187 659.1 483 66.9
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 1.6e-185 653.3 462 69.9
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 7.8e-185 651.0 481 67.4
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 9.5e-183 644.0 489 66.7
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 8.0e-182 641.0 509 62.9
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 5.2e-181 638.3 485 66.0
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.2e-180 637.1 474 67.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 5.8e-180 634.8 508 64.8
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 2.9e-179 632.5 497 63.8
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 4.9e-179 631.7 497 63.8
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 2.5e-175 619.4 460 65.9
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 6.2e-174 614.8 508 62.2
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 1.1e-170 604.0 499 61.1
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.2e-169 600.5 509 61.7
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 4.6e-169 598.6 534 57.9
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 6.8e-165 584.7 469 63.1
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 2.3e-160 569.7 477 62.1
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.2e-158 563.9 491 61.1
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 3.6e-158 562.4 504 59.5
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 4.4e-156 555.4 486 60.3
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 5.4e-146 521.9 474 59.5
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 5.1e-144 515.4 501 56.7
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 3.8e-139 499.2 470 57.4
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.3e-136 490.0 482 52.5
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 3.9e-136 489.2 515 52.8
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 8.7e-136 488.0 480 52.7
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.2e-130 469.2 401 62.3
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 2.1e-129 466.8 481 50.7
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.0e-128 464.5 379 62.3
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 2.5e-127 459.9 515 50.3
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 6.2e-126 455.3 480 49.6
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 6.1e-121 438.7 346 66.5
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 2.0e-116 423.7 458 49.8
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.3e-110 404.4 398 54.5
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.0e-108 397.1 302 64.9
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 2.9e-99 366.7 300 63.7
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 1.3e-83 314.7 509 38.7
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 3.1e-56 223.8 182 58.8
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.5e-55 221.5 693 28.1
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 8.1e-49 199.1 224 45.5
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 7.6e-47 192.6 158 58.9
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 1.4e-37 161.8 127 68.5
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.6e-28 130.2 96 66.7
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.9e-21 108.2 70 72.9
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 3.5e-20 104.0 67 73.1
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.4e-16 92.0 65 67.7
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.6e-15 87.8 100 45.0
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.9e-13 81.6 59 64.4
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-12 78.2 82 51.2
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 9.6e-10 69.3 44 72.7
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 1.6e-09 68.6 292 22.9
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 1.2e-07 62.4 253 23.7
CAN.G774.53 Capsicum annuum HOM05D005554 ORTHO05D007823 2.6e-07 61.2 258 26.4
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 4.5e-07 60.5 255 25.1
Gohir.A03G016800 Gossypium hirsutum HOM05D005554 ORTHO05D007823 7.6e-07 59.7 256 25.0
Gorai.003G158300 Gossypium raimondii HOM05D005554 ORTHO05D007823 7.6e-07 59.7 256 25.0
PGSC0003DMG402012338 Solanum tuberosum HOM05D005554 ORTHO05D007823 7.6e-07 59.7 263 25.5
Cc08_g14820 Coffea canephora HOM05D005554 ORTHO05D007823 1.0e-06 59.3 340 24.4
Gohir.D03G151100 Gossypium hirsutum HOM05D005554 ORTHO05D007823 1.3e-06 58.9 252 25.0
Actinidia14567 Actinidia chinensis HOM05D005554 ORTHO05D007823 1.7e-06 58.5 256 25.0
Oeu064085.1 Olea europaea HOM05D005554 ORTHO05D007823 1.7e-06 58.5 256 25.4
Peaxi162Scf00119g01015 Petunia axillaris HOM05D005554 ORTHO05D007823 1.7e-06 58.5 258 24.4
Hma1.2p1_0377F.1_g139310 Hydrangea macrophylla HOM05D005554 ORTHO05D007823 2.2e-06 58.2 262 24.0
Cpa.g.sc74.56 Carica papaya HOM05D005554 ORTHO05D007823 2.9e-06 57.8 262 24.8
Solyc08g081170.4 Solanum lycopersicum HOM05D005554 ORTHO05D007823 2.9e-06 57.8 258 25.2
COL.COLO4_34475 Corchorus olitorius HOM05D005554 ORTHO05D007823 3.8e-06 57.4 302 24.2
MD06G1085100 Malus domestica HOM05D005554 ORTHO05D007823 3.8e-06 57.4 262 24.4
Nitab4.5_0010813g0010 Nicotiana tabacum HOM05D005554 ORTHO05D007823 3.8e-06 57.4 263 24.0
Sopen08g029470 Solanum pennellii HOM05D005554 ORTHO05D007823 3.8e-06 57.4 263 24.7
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 5.0e-06 57.0 262 24.4
Nitab4.5_0001615g0110 Nicotiana tabacum HOM05D005554 ORTHO05D007823 5.0e-06 57.0 263 24.0
Cfa012222 Carpinus fangiana HOM05D005554 ORTHO05D007823 6.5e-06 56.6 262 24.4
Prupe.5G101100 Prunus persica HOM05D005554 ORTHO05D007823 6.5e-06 56.6 262 23.7


User provided reference genes

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