Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.3e-49 199.5 107 100.0
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.1e-35 153.3 107 72.9
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 3.1e-35 151.8 107 72.0
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 6.9e-35 150.6 107 72.9
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.6e-34 148.7 107 72.0
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 7.6e-34 147.1 107 69.2
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 6.4e-33 144.1 107 72.0
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 8.4e-33 143.7 107 70.1
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.9e-32 142.5 107 71.0
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 1.9e-32 142.5 107 69.2
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 2.7e-31 138.7 107 70.1
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 4.6e-31 137.9 109 67.0
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 1.3e-30 136.3 107 67.3
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 1.3e-30 136.3 107 66.4
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 1.7e-30 136.0 106 68.9
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.0e-30 135.2 107 69.2
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 3.9e-30 134.8 107 67.3
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 5.1e-30 134.4 106 67.9
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 5.1e-30 134.4 107 69.2
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.1e-30 134.4 107 69.2
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.1e-30 134.4 104 67.3
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 5.1e-30 134.4 106 67.9
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 1.5e-29 132.9 108 65.7
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 1.5e-29 132.9 93 74.2
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 1.9e-29 132.5 90 74.4
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 2.5e-29 132.1 101 67.3
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 62.6
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 62.6
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 67.3
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 67.3
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 63.6
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 3.3e-29 131.7 108 63.9
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 4.3e-29 131.3 108 66.7
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 68.2
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 68.2
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 66.4
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 7.3e-29 130.6 101 65.3
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 1.3e-28 129.8 108 67.6
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.3e-28 129.8 128 58.6
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.3e-28 129.8 107 66.4
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 1.6e-28 129.4 107 66.4
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 2.1e-28 129.0 98 64.3
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 2.1e-28 129.0 107 60.7
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 2.8e-28 128.6 88 70.5
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 2.8e-28 128.6 104 64.4
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 2.8e-28 128.6 106 66.0
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 4.8e-28 127.9 106 66.0
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 4.8e-28 127.9 106 67.0
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 4.8e-28 127.9 107 62.6
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 6.2e-28 127.5 99 64.6
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 6.2e-28 127.5 103 63.1
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 6.2e-28 127.5 103 63.1
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 6.2e-28 127.5 104 65.4
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.1e-27 126.7 104 65.4
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 1.1e-27 126.7 104 65.4
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 1.4e-27 126.3 106 61.3
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 1.8e-27 125.9 103 63.1
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 1.8e-27 125.9 107 59.8
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 1.8e-27 125.9 107 62.6
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.4e-27 125.6 106 63.2
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 3.1e-27 125.2 109 65.1
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 3.1e-27 125.2 106 65.1
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 4.0e-27 124.8 93 67.7
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 4.0e-27 124.8 88 67.0
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 4.0e-27 124.8 103 62.1
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 4.0e-27 124.8 107 58.9
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 5.3e-27 124.4 106 62.3
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 5.3e-27 124.4 88 68.2
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 5.3e-27 124.4 106 62.3
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 5.3e-27 124.4 107 63.6
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 6.9e-27 124.0 109 64.2
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 6.9e-27 124.0 88 65.9
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 6.9e-27 124.0 101 63.4
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 9.0e-27 123.6 88 67.0
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.2e-26 123.2 107 61.7
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 1.5e-26 122.9 93 64.5
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 1.5e-26 122.9 93 64.5
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 1.5e-26 122.9 103 63.1
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 2.0e-26 122.5 104 64.4
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 2.0e-26 122.5 104 64.4
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 2.6e-26 122.1 88 64.8
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 2.6e-26 122.1 88 64.8
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 2.6e-26 122.1 88 64.8
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 2.6e-26 122.1 88 64.8
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 4.5e-26 121.3 103 62.1
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 4.5e-26 121.3 106 61.3
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 5.8e-26 120.9 107 62.6
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 7.6e-26 120.6 88 63.6
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 7.6e-26 120.6 85 74.1
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 9.9e-26 120.2 88 68.2
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 9.9e-26 120.2 100 60.0
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 1.3e-25 119.8 88 64.8
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 1.3e-25 119.8 104 60.6
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 1.7e-25 119.4 104 60.6
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 1.7e-25 119.4 107 63.6
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 2.2e-25 119.0 88 64.8
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 2.2e-25 119.0 125 52.0
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 2.2e-25 119.0 103 62.1
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 8.4e-25 117.1 93 68.8
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 8.4e-25 117.1 105 62.9
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 8.4e-25 117.1 107 60.7
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 1.1e-24 116.7 107 62.6
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 1.4e-24 116.3 82 67.1
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 1.4e-24 116.3 103 60.2
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 1.9e-24 115.9 107 56.1
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 1.9e-24 115.9 108 59.3
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 4.2e-24 114.8 88 68.2
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 4.2e-24 114.8 107 57.9
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 5.4e-24 114.4 96 58.3
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 9.3e-24 113.6 120 57.5
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 9.3e-24 113.6 93 60.2
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.2e-23 113.2 104 58.7
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 2.7e-23 112.1 88 63.6
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 3.5e-23 111.7 105 61.0
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 4.6e-23 111.3 104 59.6
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 4.6e-23 111.3 104 59.6
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 7.9e-23 110.5 93 63.4
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 1.8e-22 109.4 104 56.7
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 2.3e-22 109.0 107 56.1
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 3.9e-22 108.2 95 62.1
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 5.1e-22 107.8 96 55.2
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 5.1e-22 107.8 102 56.9
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 6.7e-22 107.5 103 55.3
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 1.1e-21 106.7 108 55.6
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 1.5e-21 106.3 91 61.5
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 1.9e-21 105.9 107 55.1
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 3.3e-21 105.1 107 57.9
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 5.6e-21 104.4 107 54.2
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 5.6e-21 104.4 108 54.6
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 6.2e-20 100.9 75 72.0
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.6e-15 86.3 76 65.8
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 2.1e-15 85.9 74 66.2
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 4.6e-15 84.7 66 65.2
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 6.0e-15 84.3 67 71.6
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 1.8e-14 82.8 87 50.6
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 3.0e-14 82.0 83 50.6
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 5.1e-14 81.3 73 56.2
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 6.7e-14 80.9 64 60.9
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 4.3e-13 78.2 78 60.3
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 4.3e-13 78.2 74 63.5
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 5.6e-13 77.8 76 61.8
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 9.6e-13 77.0 108 41.7
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 4.8e-12 74.7 60 61.7
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.1e-11 73.6 51 70.6
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 1.5e-10 69.7 80 52.5
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 1.9e-08 62.8 69 47.8
Sp1g13000 Schrenkiella parvula HOM05D005271 ORTHO05D006072 3.9e-06 55.1 50 56.0


User provided reference genes

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