Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 7.1e-72 273.9 141 100.0
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 6.0e-55 217.6 142 78.9
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.7e-54 214.2 142 78.9
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.7e-54 214.2 142 78.9
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 5.6e-53 211.1 142 76.1
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 9.6e-53 210.3 142 76.1
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 3.6e-52 208.4 142 75.4
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 4.8e-52 208.0 141 76.6
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 4.8e-52 208.0 141 75.2
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 1.8e-51 206.1 142 76.1
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 2.4e-51 205.7 141 74.5
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 3.1e-51 205.3 136 77.2
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 1.2e-50 203.4 142 74.6
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 1.5e-50 203.0 143 74.8
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 2.0e-50 202.6 142 76.1
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 4.5e-50 201.4 128 78.9
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 5.8e-50 201.1 142 73.9
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 2.9e-49 198.7 142 75.4
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 1.1e-48 196.8 141 73.8
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 1.1e-48 196.8 141 73.0
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 1.9e-48 196.1 142 73.2
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.9e-48 196.1 141 72.3
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.9e-48 196.1 134 76.1
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 2.4e-48 195.7 142 72.5
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 2.4e-48 195.7 144 70.8
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 2.4e-48 195.7 144 70.8
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 2.4e-48 195.7 142 71.8
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 3.2e-48 195.3 142 73.9
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 4.2e-48 194.9 144 69.4
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 4.2e-48 194.9 148 70.9
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 4.2e-48 194.9 142 71.8
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 5.5e-48 194.5 166 63.9
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 7.1e-48 194.1 143 70.6
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 7.1e-48 194.1 143 70.6
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 7.1e-48 194.1 142 72.5
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 9.3e-48 193.7 142 69.7
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 1.2e-47 193.4 151 69.5
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.2e-47 193.4 141 71.6
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.1e-47 192.6 142 70.4
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 2.1e-47 192.6 146 69.2
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.7e-47 192.2 141 70.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 2.7e-47 192.2 142 73.9
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 3.5e-47 191.8 143 69.9
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 6.0e-47 191.0 142 71.8
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 6.0e-47 191.0 134 75.4
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 1.0e-46 190.3 139 70.5
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 1.0e-46 190.3 116 83.6
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 1.0e-46 190.3 126 76.2
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 1.0e-46 190.3 146 70.5
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 1.3e-46 189.9 141 70.9
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 1.8e-46 189.5 142 71.8
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 1.8e-46 189.5 127 77.2
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 2.3e-46 189.1 143 69.2
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 2.3e-46 189.1 141 70.9
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.3e-46 189.1 141 68.8
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 2.3e-46 189.1 142 69.0
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 3.0e-46 188.7 141 73.0
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.0e-46 188.7 141 69.5
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 5.1e-46 188.0 144 70.8
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 5.1e-46 188.0 128 75.8
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 6.7e-46 187.6 130 75.4
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 8.7e-46 187.2 137 72.3
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 1.1e-45 186.8 141 68.1
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 1.1e-45 186.8 141 68.1
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 1.5e-45 186.4 136 72.1
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.5e-45 186.4 119 76.5
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 1.5e-45 186.4 141 69.5
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 1.9e-45 186.0 154 66.9
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 2.5e-45 185.7 141 68.8
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 2.5e-45 185.7 119 75.6
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 4.3e-45 184.9 142 66.9
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 4.3e-45 184.9 141 69.5
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 4.3e-45 184.9 141 67.4
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 5.6e-45 184.5 142 70.4
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 5.6e-45 184.5 163 63.2
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 9.6e-45 183.7 147 64.6
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 9.6e-45 183.7 111 83.8
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 1.3e-44 183.3 126 73.0
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 1.6e-44 183.0 120 77.5
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 1.6e-44 183.0 138 70.3
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.1e-44 182.6 119 74.8
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 2.8e-44 182.2 142 69.0
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 3.7e-44 181.8 141 66.7
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 4.8e-44 181.4 141 67.4
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 2.4e-43 179.1 135 69.6
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 3.1e-43 178.7 118 77.1
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.5e-42 176.4 145 64.1
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.5e-42 176.4 145 64.1
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 2.0e-42 176.0 146 63.7
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 2.6e-42 175.6 141 66.0
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 5.8e-42 174.5 133 68.4
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 7.6e-42 174.1 142 64.1
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 1.3e-41 173.3 143 64.3
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 3.8e-41 171.8 149 63.1
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 9.3e-40 167.2 142 62.7
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 3.5e-39 165.2 141 61.7
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 4.6e-39 164.9 137 65.0
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 3.9e-38 161.8 121 69.4
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 3.7e-36 155.2 152 57.9
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 1.0e-33 147.1 125 66.4
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 1.3e-33 146.7 145 56.6
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 1.7e-33 146.4 132 60.6
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 2.1e-31 139.4 117 60.7
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 2.7e-31 139.0 100 72.0
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 3.6e-31 138.7 112 63.4
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 1.0e-30 137.1 137 57.7
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 1.3e-30 136.7 137 57.7
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 3.0e-30 135.6 137 56.9
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 3.0e-30 135.6 104 70.2
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 3.9e-30 135.2 137 56.9
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 5.1e-30 134.8 86 79.1
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 5.1e-30 134.8 137 56.9
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 6.7e-30 134.4 101 70.3
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 8.7e-30 134.0 101 70.3
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 2.5e-29 132.5 151 51.7
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 5.7e-29 131.3 119 60.5
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 5.7e-29 131.3 119 61.3
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 1.4e-27 126.7 83 75.9
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 1.8e-27 126.3 85 77.6
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 1.8e-27 126.3 87 77.0
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.4e-27 125.9 147 51.7
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 2.4e-27 125.9 85 74.1
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 1.3e-25 120.2 74 79.7
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 2.9e-25 119.0 86 69.8
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 4.2e-24 115.2 117 54.7
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 3.9e-22 108.6 154 42.9
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 3.3e-21 105.5 117 48.7
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 7.4e-21 104.4 73 72.6
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 1.8e-14 83.2 111 45.9
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 2.0e-13 79.7 84 54.8
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 5.7e-13 78.2 114 43.0
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 2.2e-12 76.3 70 58.6
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 4.1e-11 72.0 85 49.4
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 2.0e-10 69.7 45 77.8
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 7.2e-08 61.2 33 84.8
C06p20730 Brassica napus HOM05D005449 ORTHO05D027985 1.4e-06 57.0 64 50.0
BolC6t37256H Brassica oleracea HOM05D005449 ORTHO05D027985 1.4e-06 57.0 64 50.0
CBR_g10859 Chara braunii HOM05D005449 ORTHO05D006916 4.0e-06 55.5 106 33.0


User provided reference genes

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