Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 9.1e-307 1056.2 585 100.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.9e-70 271.2 619 38.3
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 5.2e-60 236.5 666 34.5
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.2e-51 208.8 524 36.3
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.5e-51 208.4 532 37.8
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 6.8e-44 183.0 641 32.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 2.6e-43 181.0 555 33.7
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 5.8e-43 179.9 633 32.2
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 1.1e-41 175.6 567 34.4
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 2.4e-41 174.5 556 32.4
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 3.2e-41 174.1 624 33.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 7.1e-41 172.9 603 32.7
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.2e-40 172.2 630 33.0
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.7e-40 171.0 628 32.6
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.3e-39 168.7 506 35.0
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 3.0e-39 167.5 521 33.2
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 6.6e-39 166.4 526 33.7
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 2.1e-37 161.4 618 32.2
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 4.7e-37 160.2 543 33.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.8e-36 158.3 633 31.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 3.1e-36 157.5 601 32.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 8.9e-36 156.0 647 31.7
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.2e-35 155.6 542 34.3
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 4.4e-35 153.7 646 31.4
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.7e-34 151.8 630 31.1
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.1e-33 149.1 567 33.3
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.9e-33 148.3 595 33.1
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 3.2e-33 147.5 554 31.9
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 3.2e-33 147.5 611 33.9
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 9.2e-33 146.0 568 30.3
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.2e-32 145.6 379 35.9
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 1.7e-31 141.7 632 31.8
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 5.6e-30 136.7 482 32.8
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 7.3e-30 136.3 621 32.4
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 9.6e-30 136.0 580 31.4
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 9.6e-30 136.0 542 30.4
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.2e-29 135.6 469 31.6
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.2e-29 135.6 394 33.5
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 1.6e-29 135.2 250 37.6
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.1e-29 134.8 536 31.5
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 2.8e-29 134.4 539 30.4
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 3.6e-29 134.0 441 32.9
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 3.6e-29 134.0 443 32.5
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 6.2e-29 133.3 586 29.7
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 8.1e-29 132.9 638 31.7
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 8.1e-29 132.9 505 31.9
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.1e-28 132.5 526 32.5
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.8e-28 131.7 551 31.6
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 2.4e-28 131.3 350 31.4
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 2.4e-28 131.3 511 30.7
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.4e-28 131.3 678 29.2
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.1e-28 131.0 613 29.5
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 3.1e-28 131.0 511 30.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 4.0e-28 130.6 522 32.4
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 8.9e-28 129.4 474 30.8
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 8.9e-28 129.4 561 31.4
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.2e-27 129.0 458 32.1
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.2e-27 129.0 634 30.9
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.5e-27 128.6 491 31.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.6e-27 127.9 585 29.7
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 4.4e-27 127.1 529 30.2
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-26 125.2 593 30.7
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.9e-26 124.4 417 31.4
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 2.9e-26 124.4 627 29.2
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 8.4e-26 122.9 623 29.7
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 8.4e-26 122.9 557 31.4
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.1e-25 122.5 510 31.2
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.4e-25 122.1 562 29.5
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.4e-25 121.3 643 28.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 9.3e-25 119.4 405 33.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 9.3e-25 119.4 468 32.1
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 1.6e-24 118.6 303 33.0
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 3.5e-24 117.5 276 34.1
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 7.8e-24 116.3 417 32.4
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 7.8e-24 116.3 567 30.0
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.0e-23 115.9 580 29.7
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.7e-23 115.2 691 28.9
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 3.9e-23 114.0 300 34.3
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 5.1e-23 113.6 350 33.1
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 6.6e-23 113.2 419 31.7
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 6.6e-23 113.2 643 28.8
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.5e-22 111.3 227 39.2
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 3.3e-22 110.9 597 30.0
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 9.6e-22 109.4 274 33.6
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.3e-21 109.0 421 32.8
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 2.8e-21 107.8 457 32.6
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 6.2e-21 106.7 591 31.3
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 6.9e-20 103.2 576 27.6
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.2e-19 102.4 586 29.2
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 1.7e-18 98.6 492 30.1
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.7e-18 98.6 439 30.5
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 2.2e-18 98.2 416 29.1
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 4.9e-18 97.1 579 29.2
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.9e-17 95.1 489 30.3
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.1e-16 91.7 315 28.9
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.1e-16 91.7 637 29.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.3e-14 84.3 360 25.0
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.6e-13 80.9 397 31.0
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.0e-11 75.1 626 26.8
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 7.6e-11 73.2 584 25.0
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.9e-06 58.5 373 24.1
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 9.6e-06 56.2 422 27.3


User provided reference genes

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