Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 1.0e-240 836.3 404 100.0
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 7.0e-189 664.1 407 78.1
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 9.7e-183 643.7 408 77.2
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.7e-182 642.9 407 76.9
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 4.8e-182 641.3 405 76.8
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 4.1e-181 638.3 402 77.1
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 2.7e-180 635.6 400 78.0
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 4.2e-178 628.2 346 85.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 4.2e-178 628.2 400 76.5
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.2e-177 626.7 386 78.0
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.6e-177 626.3 390 78.5
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.7e-177 625.5 412 74.8
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 8.0e-177 624.0 408 76.5
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 6.8e-176 620.9 373 80.4
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 8.8e-176 620.5 346 83.5
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.2e-175 620.2 404 74.3
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.2e-175 620.2 407 74.9
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.5e-175 619.8 349 84.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.5e-175 619.8 372 80.6
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.6e-175 619.0 370 80.3
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.4e-175 618.6 363 82.4
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 7.5e-175 617.5 394 75.4
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.5e-175 617.5 372 79.8
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.5e-175 617.5 372 79.8
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.8e-175 617.1 368 82.1
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 9.8e-175 617.1 346 85.5
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.3e-174 616.7 407 74.2
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.3e-174 616.7 375 78.9
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 2.8e-174 615.5 404 73.8
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 3.7e-174 615.1 397 74.8
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.1e-173 613.6 382 76.4
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.8e-173 612.8 349 84.5
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 2.4e-173 612.5 372 79.0
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.4e-173 612.5 346 84.1
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 2.4e-173 612.5 430 71.9
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 9.1e-173 610.5 348 82.2
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 2.0e-172 609.4 372 78.8
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.5e-172 608.2 345 83.5
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.0e-171 607.1 356 81.5
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.3e-171 606.7 345 83.2
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.3e-171 606.7 408 74.0
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.7e-171 606.3 350 82.9
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.7e-171 606.3 345 83.5
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.3e-171 605.9 350 82.6
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.3e-171 605.9 361 79.5
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.9e-171 605.5 390 76.2
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 2.9e-171 605.5 354 81.9
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 2.9e-171 605.5 348 81.9
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.5e-171 604.4 345 83.2
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 1.9e-170 602.8 346 83.8
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 3.2e-170 602.1 406 73.4
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 4.2e-170 601.7 376 78.2
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 5.5e-170 601.3 337 83.4
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 5.5e-170 601.3 337 84.0
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 5.5e-170 601.3 345 82.0
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 5.5e-170 601.3 337 83.7
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.2e-169 600.1 349 81.1
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.8e-169 599.0 345 82.6
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 3.6e-169 598.6 350 81.4
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.6e-169 598.6 349 81.7
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 4.7e-169 598.2 346 82.7
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 6.1e-169 597.8 379 76.0
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 6.1e-169 597.8 404 73.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 8.0e-169 597.4 346 82.4
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.0e-168 597.0 378 74.6
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.4e-168 596.7 345 82.3
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.8e-168 596.3 346 81.8
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.3e-168 595.9 356 78.9
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 3.0e-168 595.5 345 81.4
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 4.0e-168 595.1 355 79.2
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.2e-168 594.7 359 79.4
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.2e-167 593.6 349 80.2
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.5e-167 593.2 353 79.6
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.5e-167 593.2 349 81.4
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 2.6e-167 592.4 377 76.4
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.6e-167 592.4 359 78.3
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.7e-166 589.7 349 80.2
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.7e-166 589.7 353 79.3
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 2.8e-166 589.0 378 74.1
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 3.7e-166 588.6 349 80.2
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 8.3e-166 587.4 351 80.9
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.8e-165 586.3 461 65.1
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.1e-165 585.5 345 80.6
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 7.0e-165 584.3 353 79.3
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 9.2e-165 583.9 358 78.5
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.6e-164 583.2 350 79.7
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.5e-164 582.0 341 80.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 3.5e-164 582.0 341 81.2
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 4.5e-164 581.6 349 79.4
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 1.0e-163 580.5 362 78.2
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 2.9e-163 578.9 354 76.6
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.8e-163 578.6 341 80.1
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 6.6e-163 577.8 327 83.5
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 4.7e-161 571.6 319 84.6
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 7.5e-159 564.3 346 76.9
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 6.4e-158 561.2 356 75.0
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.3e-150 537.0 342 76.0
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.7e-150 536.6 342 76.0
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.0e-147 527.3 338 72.8
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.2e-145 520.4 330 73.6
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 8.1e-145 517.7 352 71.0
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 5.8e-143 511.5 348 69.5
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 9.9e-143 510.8 352 71.9
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.7e-142 508.8 395 66.8
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 1.0e-139 500.7 333 69.7
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 7.8e-132 474.6 377 63.9
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.2e-129 467.2 378 62.2
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 3.4e-127 459.1 294 74.5
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.3e-126 457.2 349 66.2
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 4.0e-120 435.6 329 61.4
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 5.4e-117 425.2 376 58.2
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.6e-113 413.7 236 81.8
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 4.5e-111 405.6 242 78.5
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 5.8e-111 405.2 248 77.0
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 9.9e-111 404.4 224 83.5
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.9e-109 400.2 328 57.9
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.1e-107 392.1 327 59.6
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.9e-98 363.6 371 49.9
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.9e-69 267.3 174 74.7
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.4e-67 261.2 287 44.9
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-62 244.6 165 72.7
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.9e-61 240.7 176 65.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 5.5e-53 212.6 169 65.1
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.2e-47 194.9 131 71.8
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 2.1e-15 87.8 59 76.3
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.1e-13 82.0 88 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.1e-13 82.0 88 48.9
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 4.9e-09 66.6 35 82.9


User provided reference genes

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