Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 4.7e-108 394.8 239 100.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.2e-74 283.9 176 80.1
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.1e-72 277.3 180 77.2
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 7.0e-72 274.6 180 75.6
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.5e-71 272.3 180 73.9
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.7e-70 270.0 179 74.9
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.7e-70 270.0 179 74.3
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 2.5e-69 266.2 178 74.7
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 7.3e-69 264.6 179 73.2
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 7.3e-69 264.6 177 74.0
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 7.3e-69 264.6 174 73.6
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.2e-68 263.8 180 71.1
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 3.6e-68 262.3 177 72.9
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 4.7e-68 261.9 177 72.9
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 4.7e-68 261.9 177 71.2
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.4e-67 260.4 180 71.7
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 2.3e-67 259.6 168 76.8
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 3.1e-67 259.2 179 70.4
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 4.0e-67 258.8 180 73.3
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.8e-67 258.1 180 70.0
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 8.9e-67 257.7 193 68.9
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.2e-66 257.3 180 70.0
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.5e-66 256.9 180 72.8
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.6e-66 256.1 180 69.4
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 4.4e-66 255.4 180 71.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 4.4e-66 255.4 180 70.6
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 5.8e-66 255.0 177 70.1
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 5.8e-66 255.0 207 65.7
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.3e-65 253.8 177 68.9
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 1.3e-65 253.8 176 73.3
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.3e-65 253.8 201 67.2
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 1.7e-65 253.4 179 69.3
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 2.2e-65 253.1 184 70.7
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.2e-65 253.1 189 68.8
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 2.9e-65 252.7 177 68.9
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 2.9e-65 252.7 177 68.9
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.9e-65 252.7 179 68.7
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 2.9e-65 252.7 183 69.4
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 3.7e-65 252.3 180 71.1
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 4.9e-65 251.9 177 68.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.4e-65 251.5 180 68.9
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.1e-64 250.8 180 68.9
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.1e-64 250.8 177 69.5
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 1.4e-64 250.4 180 70.0
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 1.4e-64 250.4 177 68.4
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.4e-64 250.4 176 68.8
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.9e-64 250.0 187 69.0
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 2.4e-64 249.6 169 72.8
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 2.4e-64 249.6 182 69.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 2.4e-64 249.6 177 67.8
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 3.2e-64 249.2 180 68.9
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 3.2e-64 249.2 180 68.9
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 7.0e-64 248.1 175 69.1
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 7.0e-64 248.1 180 71.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 9.2e-64 247.7 180 70.6
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 9.2e-64 247.7 180 68.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.2e-63 247.3 188 67.6
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.0e-63 246.5 180 67.8
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 2.0e-63 246.5 179 68.7
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 4.6e-63 245.4 180 67.8
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 7.8e-63 244.6 176 68.8
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.0e-62 244.2 176 68.8
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.7e-62 243.4 180 68.3
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 2.3e-62 243.0 176 68.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 3.9e-62 242.3 177 68.4
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 5.0e-62 241.9 179 69.3
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 8.6e-62 241.1 173 67.6
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.1e-61 240.7 180 68.3
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.5e-61 240.4 170 72.9
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 1.5e-61 240.4 177 68.4
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 4.3e-61 238.8 179 67.0
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 9.5e-61 237.7 177 67.8
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.2e-60 237.3 160 73.8
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 2.8e-60 236.1 157 74.5
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 6.2e-60 235.0 176 67.0
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 8.1e-60 234.6 174 68.4
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.8e-59 231.5 156 73.1
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 8.9e-59 231.1 153 75.2
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 8.9e-59 231.1 186 66.7
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 8.9e-59 231.1 170 68.8
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.5e-58 230.3 152 75.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 7.5e-58 228.0 179 63.7
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.9e-57 226.1 179 62.6
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 3.5e-55 219.2 160 68.1
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.8e-55 218.0 154 70.1
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.3e-54 217.2 150 73.3
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.7e-54 216.9 154 70.1
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.9e-53 213.4 166 64.5
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.9e-53 213.4 159 67.9
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 1.2e-52 210.7 151 68.2
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.2e-52 210.7 154 68.2
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 3.6e-52 209.1 179 61.5
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.2e-52 208.4 150 68.7
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 2.4e-51 206.5 174 62.1
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.0e-51 205.7 182 62.1
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.2e-50 204.1 154 64.3
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.6e-50 201.4 146 67.8
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 4.1e-48 195.7 176 57.4
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.9e-41 172.9 122 70.5
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.9e-40 170.2 179 52.0
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 6.2e-36 155.2 170 48.2
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 4.0e-35 152.5 169 55.0
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.3e-33 147.5 90 77.8
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.9e-33 146.4 181 45.9
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 7.1e-32 141.7 178 44.4
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.5e-31 139.4 97 73.2
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.0e-30 137.9 86 79.1
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.0e-30 136.3 146 53.4
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 8.7e-30 134.8 79 82.3
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.8e-28 129.8 173 43.4
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 6.4e-25 118.6 90 63.3
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.5e-21 107.5 72 73.6
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.8e-20 103.2 82 64.6
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.4e-19 100.1 65 70.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.0e-19 98.2 74 70.3
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 3.4e-18 96.3 240 30.0
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.1e-13 81.3 61 68.9
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.3e-12 77.8 85 56.5
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.3e-12 77.8 99 47.5
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 6.3e-12 75.5 56 66.1
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 5.9e-10 68.9 96 40.6
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 5.5e-08 62.4 234 27.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.1e-07 60.5 67 43.3


User provided reference genes

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