Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 4.2e-40 167.5 82 100.0
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 7.6e-18 93.6 79 58.2
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.9e-16 89.0 79 57.0
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 3.2e-16 88.2 79 55.7
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 3.2e-16 88.2 79 60.8
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 7.1e-16 87.0 74 60.8
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 2.1e-15 85.5 79 59.5
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.7e-15 85.1 79 59.5
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 4.6e-15 84.3 80 61.2
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 4.6e-15 84.3 79 58.2
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 4.6e-15 84.3 70 60.0
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 7.9e-15 83.6 79 57.0
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 1.0e-14 83.2 82 54.9
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.0e-14 83.2 79 55.7
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 3.0e-14 81.6 74 62.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.1e-14 80.9 74 59.5
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 5.1e-14 80.9 68 63.2
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 5.1e-14 80.9 77 58.4
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.1e-14 80.9 77 58.4
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 5.1e-14 80.9 73 56.2
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 8.7e-14 80.1 74 56.8
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 1.1e-13 79.7 75 57.3
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.5e-13 79.3 79 54.4
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 1.9e-13 79.0 83 55.4
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 3.3e-13 78.2 78 53.8
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 3.3e-13 78.2 70 58.6
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 4.3e-13 77.8 74 58.1
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 4.3e-13 77.8 75 53.3
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 5.7e-13 77.4 76 52.6
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 5.7e-13 77.4 74 56.8
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 5.7e-13 77.4 74 56.8
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 7.4e-13 77.0 76 51.3
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 7.4e-13 77.0 78 53.8
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.6e-12 75.9 79 57.0
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 1.6e-12 75.9 62 61.3
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 1.6e-12 75.9 70 58.6
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.1e-12 75.5 74 58.1
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 2.1e-12 75.5 75 54.7
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 2.8e-12 75.1 74 54.1
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 2.8e-12 75.1 74 55.4
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 2.8e-12 75.1 83 53.0
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 3.7e-12 74.7 76 55.3
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 3.7e-12 74.7 79 50.6
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 3.7e-12 74.7 73 53.4
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 4.8e-12 74.3 74 55.4
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 4.8e-12 74.3 75 53.3
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 4.8e-12 74.3 73 57.5
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 6.2e-12 73.9 71 56.3
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 6.2e-12 73.9 76 55.3
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 1.1e-11 73.2 76 56.6
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.4e-11 72.8 74 55.4
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 1.4e-11 72.8 76 51.3
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 1.4e-11 72.8 73 53.4
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 1.8e-11 72.4 74 54.1
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 3.1e-11 71.6 71 56.3
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 3.1e-11 71.6 74 51.4
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 3.1e-11 71.6 69 52.2
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 5.3e-11 70.9 80 56.2
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 5.3e-11 70.9 71 54.9
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 5.3e-11 70.9 74 52.7
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 6.9e-11 70.5 78 48.7
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 6.9e-11 70.5 74 52.7
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 6.9e-11 70.5 75 52.0
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 9.0e-11 70.1 78 52.6
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 9.0e-11 70.1 78 52.6
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 1.5e-10 69.3 74 52.7
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.0e-10 68.9 80 48.8
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 2.6e-10 68.6 82 47.6
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 3.4e-10 68.2 82 51.2
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 5.8e-10 67.4 60 53.3
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 7.6e-10 67.0 77 48.1
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 1.0e-09 66.6 83 48.2
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 1.0e-09 66.6 73 53.4
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 1.7e-09 65.9 71 50.7
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 2.9e-09 65.1 84 47.6
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 2.9e-09 65.1 74 48.6
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 5.0e-09 64.3 78 44.9
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 5.0e-09 64.3 74 45.9
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 6.5e-09 63.9 78 43.6
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 8.4e-09 63.5 75 48.0
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.1e-08 63.2 78 44.9
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.4e-08 62.8 56 60.7
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.9e-08 62.4 77 46.8
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 3.2e-08 61.6 81 39.5
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 1.6e-07 59.3 79 44.3
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 2.1e-07 58.9 81 45.7
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 2.7e-07 58.5 56 51.8
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 2.7e-07 58.5 58 51.7
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 4.6e-07 57.8 86 44.2
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 6.1e-07 57.4 55 50.9
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 6.1e-07 57.4 76 40.8
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 7.9e-07 57.0 85 42.4
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 3.0e-06 55.1 85 41.2
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 3.9e-06 54.7 49 57.1


User provided reference genes

Program Settings