Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy170s004 Aquilegia oxysepala HOM05D000090 ORTHO05D078328 2.3e-31 138.3 69 100.0
Aqoxy7G03218 Aquilegia oxysepala HOM05D000090 ORTHO05D000083 2.6e-19 98.2 52 96.2
QL12p025531 Quercus lobata HOM05D000090 ORTHO05D000083 3.4e-11 71.2 56 64.3
Aqoxy7G03217 Aquilegia oxysepala HOM05D000090 ORTHO05D000083 9.9e-11 69.7 52 63.5
QL09p027628 Quercus lobata HOM05D000090 ORTHO05D000083 9.9e-11 69.7 56 64.3
CiPaw.07G211200 Carya illinoinensis HOM05D000090 ORTHO05D000083 1.7e-10 68.9 52 63.5
Nn003s41398 Nelumbo nucifera HOM05D000090 ORTHO05D000083 4.9e-10 67.4 52 61.5
Nn8g40265 Nelumbo nucifera HOM05D000090 ORTHO05D000083 4.9e-10 67.4 52 61.5
Cfa013288 Carpinus fangiana HOM05D000090 ORTHO05D000083 1.9e-09 65.5 53 64.2
Haze_21767 Corylus avellana HOM05D000090 ORTHO05D000083 9.3e-09 63.2 54 61.1
Sabra06G0211000 Salix brachista HOM05D000090 ORTHO05D000083 1.2e-08 62.8 52 57.7
Potri.006G272500 Populus trichocarpa HOM05D000090 ORTHO05D000083 1.6e-08 62.4 52 55.8
QL05p083127 Quercus lobata HOM05D000090 ORTHO05D000083 2.1e-08 62.0 45 68.9
Aqoxy7G02486 Aquilegia oxysepala HOM05D000090 ORTHO05D000083 3.5e-08 61.2 48 60.4
Rhsim11G0047800 Rhododendron simsii HOM05D000090 ORTHO05D000083 3.5e-08 61.2 52 57.7
TAR383G0257 Trochodendron aralioides HOM05D000090 ORTHO05D000083 3.5e-08 61.2 45 68.9
vmacro00169 Vaccinium macrocarpon HOM05D000090 ORTHO05D000083 7.9e-08 60.1 52 57.7
QL05p083115 Quercus lobata HOM05D000090 ORTHO05D000083 1.0e-07 59.7 45 66.7
QL05p083149 Quercus lobata HOM05D000090 ORTHO05D000083 1.0e-07 59.7 45 66.7
Haze_01176 Corylus avellana HOM05D000090 ORTHO05D000083 1.3e-07 59.3 45 64.4
TAR626G0146 Trochodendron aralioides HOM05D000090 ORTHO05D000083 1.8e-07 58.9 45 64.4
Potri.006G272600 Populus trichocarpa HOM05D000090 ORTHO05D000083 2.3e-07 58.5 52 51.9
Sabra18G0013100 Salix brachista HOM05D000090 ORTHO05D000083 2.3e-07 58.5 52 55.8
Sabra18G0015800 Salix brachista HOM05D000090 ORTHO05D000083 2.3e-07 58.5 52 55.8
CsaV3_3G036340 Cucumis sativus L. HOM05D000090 ORTHO05D000083 3.9e-07 57.8 60 50.0
Rhsim11G0048000 Rhododendron simsii HOM05D000090 ORTHO05D000083 3.9e-07 57.8 52 55.8
TAR383G0840 Trochodendron aralioides HOM05D000090 ORTHO05D000083 3.9e-07 57.8 52 53.8
CiPaw.16G010600 Carya illinoinensis HOM05D000090 ORTHO05D000083 5.1e-07 57.4 45 64.4
CiPaw.16G010700 Carya illinoinensis HOM05D000090 ORTHO05D000083 5.1e-07 57.4 45 64.4
Haze_01177 Corylus avellana HOM05D000090 ORTHO05D000083 5.1e-07 57.4 44 63.6
Hma1.2p1_0370F.1_g137550 Hydrangea macrophylla HOM05D000090 ORTHO05D000083 6.7e-07 57.0 66 45.5
Hma1.2p1_2533F.1_g324005 Hydrangea macrophylla HOM05D000090 ORTHO05D000083 6.7e-07 57.0 66 45.5
Potri.018G009000 Populus trichocarpa HOM05D000090 ORTHO05D000083 6.7e-07 57.0 52 51.9
vmacro00170 Vaccinium macrocarpon HOM05D000090 ORTHO05D000083 6.7e-07 57.0 52 55.8
Manes.16G134100 Manihot esculenta HOM05D000090 ORTHO05D000083 8.7e-07 56.6 52 48.1
Potri.018G008900 Populus trichocarpa HOM05D000090 ORTHO05D000083 8.7e-07 56.6 52 53.8
MBI14_g08067_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D000083 1.5e-06 55.8 52 57.7
CiPaw.16G010500 Carya illinoinensis HOM05D000090 ORTHO05D000083 1.9e-06 55.5 45 62.2
MD17G1145300 Malus domestica HOM05D000090 ORTHO05D000083 1.9e-06 55.5 47 57.4
PSO423G0159 Papaver somniferum HOM05D000090 ORTHO05D000083 1.9e-06 55.5 52 50.0
Prupe.1G458200 Prunus persica HOM05D000090 ORTHO05D000083 1.9e-06 55.5 52 53.8
FAN27G1639 Fragaria x ananassa HOM05D000090 ORTHO05D000083 2.5e-06 55.1 52 50.0
MBI14_g08069_MAGBIO Magnolia biondii HOM05D000090 ORTHO05D000083 3.3e-06 54.7 52 55.8
RcHm_v2.0_Chr6g0305151 Rosa chinensis HOM05D000090 ORTHO05D000083 3.3e-06 54.7 45 57.8
FvH4_2g36640 Fragaria vesca HOM05D000090 ORTHO05D000083 4.3e-06 54.3 52 50.0
Prupe.1G458400 Prunus persica HOM05D000090 ORTHO05D000083 4.3e-06 54.3 52 50.0
Prupe.3G166800 Prunus persica HOM05D000090 ORTHO05D000083 4.3e-06 54.3 47 55.3
FAN20G0877 Fragaria x ananassa HOM05D000090 ORTHO05D000083 5.6e-06 53.9 52 50.0
Manes.03G092400 Manihot esculenta HOM05D000090 ORTHO05D001322 5.6e-06 53.9 45 53.3
CiPaw.16G010400 Carya illinoinensis HOM05D000090 ORTHO05D000083 7.4e-06 53.5 45 60.0
MD15G1106200 Malus domestica HOM05D000090 ORTHO05D000083 7.4e-06 53.5 52 50.0
BcaB03g16291 Brassica carinata HOM05D000090 ORTHO05D000083 9.6e-06 53.1 44 61.4
ClCG02G006100 Citrullus lanatus HOM05D000090 ORTHO05D000083 9.6e-06 53.1 53 47.2
MELO3C009389.2 Cucumis melo HOM05D000090 ORTHO05D000083 9.6e-06 53.1 60 46.7
Sp3g28740 Schrenkiella parvula HOM05D000090 ORTHO05D000083 9.6e-06 53.1 44 61.4


User provided reference genes

Program Settings