Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy168s002 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 9.7e-152 540.0 258 100.0
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 8.8e-36 154.8 194 44.3
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 3.1e-33 146.4 218 38.5
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.1e-27 127.9 229 34.9
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 7.4e-27 125.2 205 38.0
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 1.7e-26 124.0 218 35.3
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 4.1e-25 119.4 249 32.9
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 1.3e-23 114.4 204 31.9
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 2.2e-23 113.6 200 33.0
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 2.9e-23 113.2 204 31.9
Potri.008G128200 Populus trichocarpa HOM05D002727 ORTHO05D002856 5.0e-23 112.5 209 35.4
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 8.5e-23 111.7 168 36.9
Dinv05150 Davidia involucrata HOM05D002727 ORTHO05D002856 1.5e-22 110.9 216 34.7
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 1.5e-22 110.9 199 31.7
COL.COLO4_20450 Corchorus olitorius HOM05D002727 ORTHO05D002856 1.9e-22 110.5 157 42.0
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 4.2e-22 109.4 191 34.0
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 5.5e-22 109.0 229 34.5
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 7.2e-22 108.6 215 31.2
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 9.4e-22 108.2 221 33.0
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 9.4e-22 108.2 220 33.2
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 1.2e-21 107.8 200 34.5
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 2.7e-21 106.7 227 31.3
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 3.6e-21 106.3 239 32.2
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 3.6e-21 106.3 170 39.4
Prupe.1G322000 Prunus persica HOM05D002727 ORTHO05D002856 3.6e-21 106.3 138 40.6
Sabra08G0096300 Salix brachista HOM05D002727 ORTHO05D002856 3.6e-21 106.3 169 37.9
Sabra17G0092700 Salix brachista HOM05D002727 ORTHO05D002856 3.6e-21 106.3 202 34.7
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 6.1e-21 105.5 190 34.7
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 1.0e-20 104.8 197 34.0
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 1.4e-20 104.4 178 34.3
PSO478G1097 Papaver somniferum HOM05D002727 ORTHO05D002856 1.4e-20 104.4 222 34.2
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-20 104.0 178 34.3
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-20 104.0 178 34.3
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 1.8e-20 104.0 196 32.7
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 2.3e-20 103.6 180 35.0
PSO017G6820 Papaver somniferum HOM05D002727 ORTHO05D002856 3.0e-20 103.2 222 32.4
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 4.0e-20 102.8 194 32.0
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 5.2e-20 102.4 199 32.7
Ca_24568_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 6.7e-20 102.1 211 33.6
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 6.7e-20 102.1 134 38.8
PSO478G1911 Papaver somniferum HOM05D002727 ORTHO05D002856 1.1e-19 101.3 232 31.9
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.5e-19 100.9 181 32.6
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 1.5e-19 100.9 193 33.2
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 1.5e-19 100.9 199 29.1
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 1.5e-19 100.9 134 38.8
Manes.14G135600 Manihot esculenta HOM05D002727 ORTHO05D002856 2.0e-19 100.5 186 31.2
Potri.017G111600 Populus trichocarpa HOM05D002727 ORTHO05D002856 2.0e-19 100.5 216 33.3
Eucgr.G02206 Eucalyptus grandis HOM05D002727 ORTHO05D002856 3.3e-19 99.8 222 32.4
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 4.4e-19 99.4 202 34.2
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 4.4e-19 99.4 213 33.8
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 4.4e-19 99.4 175 34.9
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 7.5e-19 98.6 196 32.7
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 7.5e-19 98.6 195 32.3
Medtr5g044170 Medicago truncatula HOM05D002727 ORTHO05D002856 9.7e-19 98.2 208 33.2
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-18 97.8 213 32.9
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.3e-18 97.8 216 32.9
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 1.3e-18 97.8 216 32.9
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 1.3e-18 97.8 207 32.4
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-18 97.4 213 33.3
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 2.2e-18 97.1 225 30.2
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 2.2e-18 97.1 144 42.4
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 2.8e-18 96.7 208 32.2
FAN02G0051 Fragaria x ananassa HOM05D002727 ORTHO05D002856 4.8e-18 95.9 212 32.5
FAN05G4306 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.2e-18 95.1 220 31.8
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 1.1e-17 94.7 137 39.4
Manes.17G103100 Manihot esculenta HOM05D002727 ORTHO05D002856 1.1e-17 94.7 225 31.1
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 1.4e-17 94.4 193 32.1
TPR.G24442 Trifolium pratense HOM05D002727 ORTHO05D002856 1.4e-17 94.4 131 39.7
FvH4_6g53540 Fragaria vesca HOM05D002727 ORTHO05D002856 1.8e-17 94.0 220 30.9
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 2.4e-17 93.6 200 30.0
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 2.4e-17 93.6 200 30.0
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 2.4e-17 93.6 201 31.8
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.1e-17 93.2 207 31.4
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.1e-17 93.2 207 31.4
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 4.1e-17 92.8 227 31.3
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 4.1e-17 92.8 195 31.8
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 7.0e-17 92.0 176 34.7
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 7.0e-17 92.0 143 38.5
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 7.0e-17 92.0 207 30.9
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.0e-17 92.0 207 30.9
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 9.1e-17 91.7 176 34.1
FAN14G5438 Fragaria x ananassa HOM05D002727 ORTHO05D002856 9.1e-17 91.7 220 30.9
Prupe.3G306500 Prunus persica HOM05D002727 ORTHO05D002856 9.1e-17 91.7 228 28.5
Atru.chr11.374 Acer truncatum HOM05D002727 ORTHO05D002856 1.2e-16 91.3 221 31.2
Psat2g129760 Pisum sativum HOM05D002727 ORTHO05D002856 1.2e-16 91.3 129 39.5
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 1.6e-16 90.9 202 29.7
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 1.6e-16 90.9 204 28.4
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 2.0e-16 90.5 170 35.3
ECA232G4731 Erigeron canadensis HOM05D002727 ORTHO05D002856 2.7e-16 90.1 221 26.2
TWI79G1492 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 2.7e-16 90.1 123 39.0
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 2.7e-16 90.1 223 30.0
Cpa.g.sc65.122 Carica papaya HOM05D002727 ORTHO05D002856 3.5e-16 89.7 127 41.7
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 3.5e-16 89.7 197 28.9
arahy.Tifrunner.gnm1.ann1.AV0RHQ Arachis hypogaea HOM05D002727 ORTHO05D002856 5.9e-16 89.0 225 31.1
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 5.9e-16 89.0 195 29.7
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 5.9e-16 89.0 153 33.3
Eucgr.G02210 Eucalyptus grandis HOM05D002727 ORTHO05D002856 5.9e-16 89.0 222 31.5
Potri.008G127500 Populus trichocarpa HOM05D002727 ORTHO05D002856 7.7e-16 88.6 126 42.9
Ah.02g128090 Amaranthus hybridus HOM05D002727 ORTHO05D002856 1.3e-15 87.8 215 29.8
Cpa.g.sc65.111 Carica papaya HOM05D002727 ORTHO05D002856 1.7e-15 87.4 126 37.3
ECA233G4969 Erigeron canadensis HOM05D002727 ORTHO05D002856 1.7e-15 87.4 211 28.4
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.7e-15 87.4 207 30.4
arahy.Tifrunner.gnm1.ann1.PT8N4B Arachis hypogaea HOM05D002727 ORTHO05D002856 2.2e-15 87.0 225 32.0
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 2.2e-15 87.0 170 34.1
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.2e-15 87.0 204 31.4
PSO017G3536 Papaver somniferum HOM05D002727 ORTHO05D002856 2.2e-15 87.0 147 37.4
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 2.2e-15 87.0 202 31.7
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 2.2e-15 87.0 202 31.7
Ciclev10017720m.g Citrus clementina HOM05D002727 ORTHO05D002856 2.9e-15 86.7 130 37.7
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 2.9e-15 86.7 202 31.7
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 3.8e-15 86.3 197 28.4
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 3.8e-15 86.3 205 30.2
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 3.8e-15 86.3 203 31.5
RcHm_v2.0_Chr2g0175581 Rosa chinensis HOM05D002727 ORTHO05D002856 3.8e-15 86.3 122 41.8
THA.LOC104824147 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 5.0e-15 85.9 175 29.7
A04p14000 Brassica napus HOM05D002727 ORTHO05D002856 6.5e-15 85.5 211 33.2
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 6.5e-15 85.5 171 29.8
BraA04t17062Z Brassica rapa HOM05D002727 ORTHO05D002856 1.1e-14 84.7 211 32.7
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 1.1e-14 84.7 129 39.5
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 1.1e-14 84.7 165 35.2
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 1.5e-14 84.3 200 32.5
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 1.5e-14 84.3 209 30.1
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 3.2e-14 83.2 206 32.5
CANSAT64G1895 Cannabis sativa HOM05D002727 ORTHO05D002856 4.2e-14 82.8 139 33.1
BcaC02g08989 Brassica carinata HOM05D002727 ORTHO05D002856 9.4e-14 81.6 164 34.8
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 1.2e-13 81.3 205 27.3
FAN03G1798 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.6e-13 80.9 170 34.1
Lj2g0009169 Lotus japonicus HOM05D002727 ORTHO05D002856 1.6e-13 80.9 219 29.2
BcaB06g27576 Brassica carinata HOM05D002727 ORTHO05D002856 2.1e-13 80.5 138 37.7
FvH4_7g12190 Fragaria vesca HOM05D002727 ORTHO05D002856 2.1e-13 80.5 202 30.2
arahy.Tifrunner.gnm1.ann1.A4HJXM Arachis hypogaea HOM05D002727 ORTHO05D002856 2.7e-13 80.1 131 38.2
arahy.Tifrunner.gnm1.ann1.L56H08 Arachis hypogaea HOM05D002727 ORTHO05D002856 2.7e-13 80.1 131 38.2
C04p48030 Brassica napus HOM05D002727 ORTHO05D002856 3.6e-13 79.7 138 37.0
BolC4t26395H Brassica oleracea HOM05D002727 ORTHO05D002856 3.6e-13 79.7 138 37.0
Thhalv10028170m.g Eutrema salsugineum HOM05D002727 ORTHO05D002856 4.7e-13 79.3 148 34.5
Atru.chr11.407 Acer truncatum HOM05D002727 ORTHO05D002856 6.1e-13 79.0 118 36.4
MD09G1010600 Malus domestica HOM05D002727 ORTHO05D002856 8.0e-13 78.6 125 36.8
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.0e-12 78.2 198 30.8
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 4.0e-12 76.3 140 35.0
THA.LOC104824571 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 4.0e-12 76.3 134 35.1
Carub.0007s3456 Capsella rubella HOM05D002727 ORTHO05D002856 5.2e-12 75.9 141 33.3
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.2e-12 75.9 202 29.2
PSO017G4651 Papaver somniferum HOM05D002727 ORTHO05D002856 5.2e-12 75.9 230 32.2
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 6.8e-12 75.5 196 29.6
AT5G40940 Arabidopsis thaliana HOM05D002727 ORTHO05D002856 1.2e-11 74.7 142 33.1
Aa31LG1G13580 Aethionema arabicum HOM05D002727 ORTHO05D002856 1.5e-11 74.3 137 34.3
FAN06G1687 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.0e-11 73.9 124 36.3
Sc18g0004340 Simmondsia chinensis HOM05D002727 ORTHO05D002856 2.0e-11 73.9 149 34.9
PSO478G0105 Papaver somniferum HOM05D002727 ORTHO05D002856 3.4e-11 73.2 230 30.4
Sp7g01010 Schrenkiella parvula HOM05D002727 ORTHO05D002856 5.7e-11 72.4 139 35.3
AL7G48630 Arabidopsis lyrata HOM05D002727 ORTHO05D002856 9.8e-11 71.6 138 33.3
Glyma.09G119800 Glycine max HOM05D002727 ORTHO05D002856 1.3e-10 71.2 152 30.3
CARHR213470 Cardamine hirsuta HOM05D002727 ORTHO05D002856 1.7e-10 70.9 138 34.1
Ca_24293_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 2.2e-10 70.5 202 30.2
Lalb_Chr24g0403301 Lupinus albus HOM05D002727 ORTHO05D002856 2.2e-10 70.5 191 29.3
FAN10G2401 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.8e-10 70.1 106 36.8
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 1.8e-09 67.4 108 34.3
CARHR253380 Cardamine hirsuta HOM05D002727 ORTHO05D002856 1.8e-09 67.4 128 34.4
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 1.8e-09 67.4 157 34.4
Dinv18560 Davidia involucrata HOM05D007205 ORTHO05D009175 5.4e-09 65.9 129 36.4
FAN07G1475 Fragaria x ananassa HOM05D005453 ORTHO05D006520 9.1e-09 65.1 142 33.1
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 1.6e-08 64.3 80 46.2
Cpa.g.sc34.48 Carica papaya HOM05D007205 ORTHO05D009175 3.5e-08 63.2 198 27.3
AT5G06920 Arabidopsis thaliana HOM05D007205 ORTHO05D009175 3.8e-07 59.7 82 36.6
TWI75G1301 Tripterygium wilfordii HOM05D007205 ORTHO05D009175 3.8e-07 59.7 158 32.9
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 8.5e-07 58.5 120 35.8
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 8.5e-07 58.5 139 28.1
Actinidia26664 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.5e-06 57.8 114 36.8
VMungo0251G0055 Vigna mungo HOM05D007205 ORTHO05D009175 1.5e-06 57.8 125 30.4
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.5e-06 57.0 71 33.8
Thhalv10015696m.g Eutrema salsugineum HOM05D007205 ORTHO05D009175 2.5e-06 57.0 80 36.2
FAN07G0027 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.5e-06 57.0 124 34.7
FAN07G2473 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.2e-06 56.6 114 35.1
SEGI_15553 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 3.2e-06 56.6 118 29.7
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 4.2e-06 56.2 139 25.9
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 4.2e-06 56.2 139 27.3
PGR042G1067 Punica granatum HOM05D007205 ORTHO05D009175 4.2e-06 56.2 141 29.8
Haze_12995 Corylus avellana HOM05D007205 ORTHO05D009175 5.5e-06 55.8 135 31.9
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 5.5e-06 55.8 109 31.2
Psat3g178240 Pisum sativum HOM05D002727 ORTHO05D002856 5.5e-06 55.8 103 31.1
SEGI_37477 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 5.5e-06 55.8 104 29.8
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 7.2e-06 55.5 104 30.8
Ca_01558_v3 Cicer arietinum L. HOM05D007205 ORTHO05D009175 9.4e-06 55.1 106 33.0


User provided reference genes

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