Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 1.3e-197 693.0 385 100.0
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 3.8e-192 674.9 385 96.4
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 4.7e-134 481.9 254 95.7
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 8.0e-134 481.1 292 86.6
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 1.5e-132 476.9 274 89.1
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 4.4e-132 475.3 253 94.9
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 2.4e-130 469.5 269 88.5
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 8.8e-125 451.1 250 92.4
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 3.1e-122 442.6 264 86.0
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 2.7e-121 439.5 241 92.5
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 4.9e-115 418.7 252 86.9
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 9.2e-114 414.5 252 86.1
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.0e-112 411.0 308 73.4
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.3e-112 410.6 215 95.3
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 5.0e-112 408.7 258 81.4
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 5.0e-112 408.7 258 81.4
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 5.0e-112 408.7 258 81.4
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 5.0e-112 408.7 258 81.4
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 5.0e-112 408.7 258 81.4
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 5.0e-112 408.7 260 81.9
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 2.5e-111 406.4 269 79.6
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 2.5e-111 406.4 269 79.6
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 3.3e-111 406.0 285 76.1
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 3.3e-111 406.0 285 76.1
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 2.1e-110 403.3 252 82.9
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 3.6e-110 402.5 259 80.7
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 4.1e-106 389.0 239 84.9
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 1.6e-102 377.1 246 80.5
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.0e-96 357.8 268 73.5
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.3e-96 357.5 268 73.1
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 2.1e-94 350.1 251 75.7
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 4.0e-93 345.9 252 74.6
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 2.6e-92 343.2 262 72.1
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 7.5e-92 341.7 259 72.2
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 2.9e-91 339.7 306 64.7
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 6.4e-91 338.6 252 72.2
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 9.2e-90 334.7 197 86.8
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 9.2e-90 334.7 252 71.0
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 7.8e-89 331.6 231 76.6
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 7.8e-89 331.6 231 76.6
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-87 327.4 231 76.2
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 2.1e-86 323.6 201 82.6
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 2.4e-85 320.1 231 76.2
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.4e-84 315.8 263 65.8
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 2.2e-83 313.5 170 94.7
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 8.4e-83 311.6 225 74.2
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 5.6e-79 298.9 215 76.3
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 2.9e-75 286.6 149 98.0
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 1.1e-66 258.1 166 82.5
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 5.6e-55 219.2 248 52.8
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 7.6e-52 208.8 167 69.5
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 8.4e-51 205.3 195 62.6
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 2.1e-49 200.7 104 94.2
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 3.5e-49 199.9 180 61.7
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 6.7e-48 195.7 142 75.4
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 6.7e-48 195.7 142 75.4
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 8.7e-48 195.3 143 72.0
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-47 194.9 140 76.4
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 9.7e-47 191.8 252 48.8
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-45 187.6 109 84.4
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-44 184.9 141 73.8
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-44 184.5 108 83.3
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 2.5e-42 177.2 108 82.4
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 4.2e-42 176.4 152 68.4
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 9.3e-42 175.3 104 85.6
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 4.6e-41 172.9 129 71.3
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-39 167.9 126 74.6
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 2.4e-37 160.6 198 53.0
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 2.4e-37 160.6 89 87.6
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 4.1e-37 159.8 103 74.8
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 9.1e-37 158.7 202 53.0
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 1.2e-36 158.3 92 84.8
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 1.3e-35 154.8 156 57.7
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.1e-34 151.8 157 58.0
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 3.9e-32 143.3 102 75.5
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 3.9e-32 143.3 151 55.6
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 1.1e-31 141.7 72 97.2
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 1.1e-31 141.7 80 90.0
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 9.7e-31 138.7 217 42.4
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 3.7e-30 136.7 91 80.2
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 3.7e-30 136.7 91 80.2
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 6.3e-30 136.0 72 93.1
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 9.1e-29 132.1 67 97.0
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 2.6e-28 130.6 72 88.9
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 4.5e-28 129.8 70 91.4
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 5.9e-28 129.4 91 76.9
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 8.5e-27 125.6 76 75.0
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 1.4e-26 124.8 76 75.0
MD15G1429600 Malus domestica HOM05D006604 ORTHO05D007974 2.5e-26 124.0 81 79.0
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 7.2e-26 122.5 63 92.1
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 9.4e-26 122.1 71 83.1
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 2.7e-25 120.6 141 51.1
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.1e-23 115.2 62 90.3
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.1e-23 115.2 57 98.2
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 5.7e-23 112.8 162 47.5
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 1.7e-22 111.3 100 62.0
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 2.2e-22 110.9 185 42.7
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 4.8e-22 109.8 61 90.2
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 1.6e-20 104.8 87 66.7
Mapoly1449s0001 Marchantia polymorpha HOM05D006604 ORTHO05D007974 2.0e-20 104.4 196 32.1
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 3.5e-20 103.6 74 74.3
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 5.0e-19 99.8 60 80.0
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 3.6e-17 93.6 60 75.0
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-16 91.7 108 51.9
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-16 91.3 54 83.3
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 5.3e-13 79.7 59 71.2
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 7.0e-13 79.3 45 82.2
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 1.6e-12 78.2 49 83.7
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 5.9e-12 76.3 55 63.6
SHI37140 Sapria himalayana HOM05D006604 ORTHO05D007974 3.8e-11 73.6 45 77.8
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 1.1e-10 72.0 56 58.9
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 2.5e-10 70.9 46 78.3
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 5.5e-10 69.7 44 79.5
SHI36463 Sapria himalayana HOM05D006604 ORTHO05D007974 5.5e-10 69.7 43 79.1
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 9.4e-10 68.9 149 32.9
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 9.4e-10 68.9 100 45.0
SHI31173 Sapria himalayana HOM05D006604 ORTHO05D007974 1.6e-09 68.2 168 35.1
ClCG06G014670 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.2e-07 62.0 36 86.1
ClCG07G016010 Citrullus lanatus HOM05D006604 ORTHO05D007974 1.5e-07 61.6 33 87.9
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 1.5e-07 61.6 46 71.7
SHI36366 Sapria himalayana HOM05D006604 ORTHO05D007974 1.5e-07 61.6 32 90.6
BolC1t03453H Brassica oleracea HOM05D013555 ORTHO05D007974 3.4e-07 60.5 76 44.7
Medtr0248s0030 Medicago truncatula HOM05D006604 ORTHO05D007974 5.7e-07 59.7 34 88.2
SHI12053 Sapria himalayana HOM05D006604 ORTHO05D007974 5.7e-07 59.7 42 71.4
CARHR288260 Cardamine hirsuta HOM05D006604 ORTHO05D007974 1.3e-06 58.5 30 86.7
ECA003G0002 Erigeron canadensis HOM05D006604 ORTHO05D007974 2.2e-06 57.8 44 70.5
SHI36696 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-06 57.4 28 92.9
SHI50563 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-06 57.4 28 92.9
SHI37563 Sapria himalayana HOM05D006604 ORTHO05D007974 3.7e-06 57.0 30 86.7


User provided reference genes

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