Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.3e-66 254.2 128 100.0
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.5e-44 183.0 101 92.1
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.3e-44 181.4 101 91.1
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.6e-28 129.0 101 64.4
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 9.7e-28 127.1 102 64.7
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.8e-27 125.6 100 67.0
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 4.8e-27 124.8 97 64.9
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 6.3e-27 124.4 101 61.4
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 6.3e-27 124.4 100 64.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 3.1e-26 122.1 100 65.0
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 5.3e-26 121.3 100 65.0
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 7.0e-26 120.9 92 65.2
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 7.0e-26 120.9 100 62.0
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 9.1e-26 120.6 93 62.4
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.2e-25 120.2 99 63.6
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.5e-25 119.8 92 65.2
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.0e-25 119.4 92 63.0
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 3.5e-25 118.6 92 66.3
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-24 116.7 92 63.0
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.8e-24 115.2 100 61.0
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 8.5e-24 114.0 100 60.0
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 8.5e-24 114.0 132 53.0
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 8.5e-24 114.0 102 61.8
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.1e-23 113.6 100 60.0
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 5.5e-23 111.3 91 64.8
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 5.5e-23 111.3 90 64.4
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 9.4e-23 110.5 91 61.5
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 9.4e-23 110.5 101 60.4
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 9.4e-23 110.5 101 59.4
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 1.2e-22 110.2 92 64.1
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.6e-22 109.8 100 59.0
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.1e-22 109.4 96 58.3
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.7e-22 109.0 100 56.0
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.7e-22 109.0 100 58.0
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 3.6e-22 108.6 89 62.9
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.6e-22 108.6 92 62.0
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 3.6e-22 108.6 100 57.0
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 3.6e-22 108.6 100 56.0
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.7e-22 108.2 93 58.1
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 4.7e-22 108.2 89 66.3
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 6.1e-22 107.8 91 62.6
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 8.0e-22 107.5 92 65.2
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.0e-21 107.1 99 56.6
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.4e-21 106.7 94 62.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.8e-21 106.3 100 54.0
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.3e-21 105.9 102 57.8
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 3.0e-21 105.5 100 56.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 3.0e-21 105.5 91 56.0
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.0e-21 105.5 95 60.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 4.0e-21 105.1 88 62.5
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.0e-21 105.1 102 56.9
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.2e-21 104.8 91 60.4
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 6.7e-21 104.4 90 60.0
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 8.8e-21 104.0 89 64.0
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 8.8e-21 104.0 100 55.0
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 8.8e-21 104.0 97 55.7
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 1.1e-20 103.6 90 62.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.1e-20 103.6 100 52.0
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 1.5e-20 103.2 91 63.7
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 2.0e-20 102.8 91 62.6
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 4.4e-20 101.7 90 58.9
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 5.7e-20 101.3 100 54.0
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.7e-20 101.3 100 54.0
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 7.4e-20 100.9 90 57.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 7.4e-20 100.9 91 58.2
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 9.7e-20 100.5 100 54.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.3e-19 100.1 100 54.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.3e-19 100.1 99 54.5
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.7e-19 99.8 93 58.1
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.7e-19 99.8 100 53.0
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.7e-19 99.8 90 57.8
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 2.2e-19 99.4 93 57.0
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 2.8e-19 99.0 89 58.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.8e-19 99.0 100 49.0
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 3.7e-19 98.6 89 58.4
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 3.7e-19 98.6 89 58.4
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.7e-19 98.6 89 58.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.8e-19 98.2 100 53.0
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 4.8e-19 98.2 95 54.7
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 6.3e-19 97.8 97 54.6
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 8.2e-19 97.4 89 57.3
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 8.2e-19 97.4 83 60.2
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 1.4e-18 96.7 88 60.2
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.4e-18 96.7 100 53.0
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.4e-18 96.7 89 60.7
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 1.8e-18 96.3 93 55.9
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.8e-18 96.3 89 57.3
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.1e-18 95.5 90 55.6
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 4.1e-18 95.1 101 51.5
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 4.1e-18 95.1 90 54.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 4.1e-18 95.1 91 56.0
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 9.1e-18 94.0 91 54.9
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-17 93.6 100 52.0
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.2e-17 93.6 92 55.4
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 3.5e-17 92.0 77 63.6
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 3.5e-17 92.0 104 49.0
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.5e-17 92.0 88 52.3
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.3e-16 90.1 102 48.0
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.2e-16 89.4 100 48.0
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.9e-16 89.0 93 50.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.0e-16 88.2 102 48.0
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 5.0e-16 88.2 120 45.8
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 2.5e-15 85.9 100 48.0
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 3.6e-14 82.0 88 50.0
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 3.6e-14 82.0 88 50.0
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 3.6e-14 82.0 101 44.6
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 4.7e-14 81.6 91 49.5
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 6.1e-14 81.3 100 47.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.1e-14 81.3 104 45.2
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 1.0e-13 80.5 91 47.3
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.0e-13 80.5 76 60.5
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.0e-13 80.5 92 44.6
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.0e-13 79.0 70 62.9
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.0e-13 79.0 104 44.2
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.0e-12 76.3 89 48.3
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.0e-12 76.3 89 48.3
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 9.8e-12 73.9 51 58.8
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 2.2e-11 72.8 52 57.7
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-10 70.5 93 41.9
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 1.8e-10 69.7 85 45.9
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.2e-09 67.0 47 57.4
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.7e-09 65.9 47 70.2
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 2.9e-08 62.4 95 38.9
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 6.5e-08 61.2 124 32.3
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.2e-07 58.9 89 32.6


User provided reference genes

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