Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g108800 Amaranthus hybridus HOM05D009559 ORTHO05D017251 5.3e-306 1053.5 522 100.0
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.1e-199 700.3 546 67.4
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 5.6e-191 671.4 516 68.0
Ah.07g198370 Amaranthus hybridus HOM05D009559 ORTHO05D006373 5.1e-176 621.7 465 67.5
Ah.13g067530 Amaranthus hybridus HOM05D009559 ORTHO05D017251 2.6e-172 609.4 568 60.0
Ah.03g144120 Amaranthus hybridus HOM05D009559 ORTHO05D061651 3.3e-143 512.7 474 61.8
Ah.12g060460 Amaranthus hybridus HOM05D009559 ORTHO05D061131 1.3e-142 510.8 398 67.8
Ah.06g186880 Amaranthus hybridus HOM05D001168 ORTHO05D001044 1.6e-137 493.8 520 57.3
Ah.01g010260 Amaranthus hybridus HOM05D009559 ORTHO05D060279 5.4e-133 478.8 318 75.2
Ah.03g148490 Amaranthus hybridus HOM05D009559 ORTHO05D060985 2.3e-128 463.4 318 73.6
Ah.10g025310 Amaranthus hybridus HOM05D009559 ORTHO05D061000 1.2e-113 414.5 455 53.8
Ah.03g144950 Amaranthus hybridus HOM05D009559 ORTHO05D061861 4.4e-103 379.4 249 75.9
Ah.04g157130 Amaranthus hybridus HOM05D009559 ORTHO05D059839 2.0e-79 300.8 269 59.9
Ah.01g010550 Amaranthus hybridus HOM05D009559 ORTHO05D061443 1.5e-74 284.6 179 78.8
Ah.04g157090 Amaranthus hybridus HOM05D000001 ORTHO05D000003 1.0e-70 271.9 271 55.4
Ah.07g198630 Amaranthus hybridus HOM05D009559 ORTHO05D060977 1.4e-69 268.1 193 76.2
Ah.01g010560 Amaranthus hybridus HOM05D009559 ORTHO05D061116 2.1e-68 264.2 189 70.9
Ah.05g174360 Amaranthus hybridus HOM05D009559 ORTHO05D061977 1.1e-64 251.9 304 50.7
Ah.02g119650 Amaranthus hybridus HOM05D009559 ORTHO05D060872 1.7e-62 244.6 362 47.5
Ah.01g010270 Amaranthus hybridus HOM05D009559 ORTHO05D060265 3.8e-62 243.4 206 65.5
Ah.03g146730 Amaranthus hybridus HOM05D009559 ORTHO05D017251 3.4e-55 220.3 506 31.6
Ah.12g060450 Amaranthus hybridus HOM05D009559 ORTHO05D059838 8.5e-54 215.7 179 69.3
Ah.02g122400 Amaranthus hybridus HOM05D009559 ORTHO05D061196 2.5e-50 204.1 130 86.9
Ah.01g009990 Amaranthus hybridus HOM05D009559 ORTHO05D006373 2.0e-42 177.9 91 86.8
Ah.01g012500 Amaranthus hybridus HOM05D009559 ORTHO05D061054 9.7e-42 175.6 132 65.2
Ah.03g144940 Amaranthus hybridus HOM05D009559 ORTHO05D061428 1.2e-36 158.7 105 80.0
Ah.01g013360 Amaranthus hybridus HOM05D009559 ORTHO05D061145 2.2e-33 147.9 105 68.6
Ah.08g223330 Amaranthus hybridus HOM05D009559 ORTHO05D060338 2.3e-19 101.3 63 73.0
Ah.05g174810 Amaranthus hybridus HOM05D009559 ORTHO05D061784 3.0e-19 100.9 53 83.0
Ah.07g198380 Amaranthus hybridus HOM05D009559 ORTHO05D061628 5.5e-13 80.1 47 74.5
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 8.9e-11 72.8 415 22.7
Ah.11g039550 Amaranthus hybridus HOM05D009559 ORTHO05D060127 1.5e-10 72.0 87 37.9
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 1.1e-08 65.9 138 29.7
EL10Ac4g08685 Beta vulgaris HOM05D015602 ORTHO05D006373 5.9e-07 60.1 96 33.3
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 7.8e-07 59.7 96 33.3
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 2.3e-06 58.2 208 27.4
EL10As4g23418 Beta vulgaris HOM05D015602 ORTHO05D006373 3.9e-06 57.4 103 31.1
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 3.9e-06 57.4 125 26.4


User provided reference genes

Program Settings