Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.0e-97 360.1 191 100.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 4.5e-53 211.8 169 71.6
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.3e-48 195.7 157 71.3
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.3e-47 193.7 157 70.7
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 5.3e-38 161.8 173 59.0
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.5e-37 160.2 170 61.2
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.5e-37 160.2 170 61.2
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 5.9e-37 158.3 177 57.6
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 5.0e-36 155.2 174 58.0
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.4e-35 153.7 178 58.4
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 5.5e-35 151.8 176 56.8
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 2.1e-34 149.8 170 54.1
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.1e-34 149.8 172 58.7
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.4e-33 147.1 181 54.7
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 2.3e-33 146.4 163 54.6
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 3.9e-33 145.6 163 55.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 5.1e-33 145.2 174 54.6
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 1.1e-32 144.1 171 55.0
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.0e-32 143.3 177 53.7
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 2.0e-32 143.3 179 54.7
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.0e-32 143.3 163 54.0
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 3.3e-32 142.5 177 52.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 3.3e-32 142.5 181 52.5
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 4.4e-32 142.1 181 51.4
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 7.4e-32 141.4 171 55.6
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.7e-31 140.2 162 56.8
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 2.2e-31 139.8 183 54.1
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.2e-31 139.8 168 53.6
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.7e-31 139.0 169 50.9
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 3.7e-31 139.0 174 54.0
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.7e-31 139.0 178 52.2
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.3e-31 138.3 163 54.6
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 8.2e-31 137.9 144 59.7
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-30 137.5 150 59.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-30 137.5 150 59.3
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 1.4e-30 137.1 164 55.5
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.8e-30 136.7 181 51.4
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.8e-30 136.7 167 57.5
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.4e-30 136.3 176 52.3
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.1e-30 136.0 172 52.9
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.1e-30 136.0 172 52.9
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 4.1e-30 135.6 163 54.6
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 5.3e-30 135.2 176 53.4
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-29 133.7 160 54.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-29 133.7 160 54.4
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.5e-29 133.7 161 54.0
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.4e-29 132.5 177 52.0
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 4.5e-29 132.1 164 56.1
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 7.7e-29 131.3 164 52.4
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.7e-29 131.3 158 57.0
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.7e-29 131.3 99 71.7
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.0e-28 131.0 163 53.4
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.0e-28 131.0 176 50.6
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 1.0e-28 131.0 164 55.5
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.3e-28 130.6 167 53.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.3e-28 130.6 167 54.5
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.3e-28 130.6 160 56.9
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.7e-28 130.2 164 54.3
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.7e-28 130.2 160 53.8
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 2.2e-28 129.8 129 61.2
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 2.2e-28 129.8 174 51.1
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.9e-28 129.4 167 53.3
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 3.8e-28 129.0 166 53.0
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 5.0e-28 128.6 108 65.7
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 6.5e-28 128.3 184 48.9
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 1.4e-27 127.1 164 54.3
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.4e-27 127.1 119 64.7
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.2e-27 125.9 130 60.8
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 3.2e-27 125.9 171 53.2
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 4.2e-27 125.6 171 49.7
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 4.2e-27 125.6 163 53.4
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 4.2e-27 125.6 163 53.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 4.2e-27 125.6 174 48.3
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 4.2e-27 125.6 120 62.5
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 9.4e-27 124.4 165 52.7
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.2e-26 124.0 89 73.0
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.6e-26 123.6 164 51.2
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.6e-26 123.6 164 51.2
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.6e-26 123.6 166 51.8
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.1e-26 123.2 82 75.6
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.1e-26 123.2 164 52.4
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 2.1e-26 123.2 125 60.0
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.7e-26 122.9 172 49.4
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 3.6e-26 122.5 140 52.9
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 4.7e-26 122.1 164 50.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 4.7e-26 122.1 170 50.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 6.1e-26 121.7 161 50.3
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 7.9e-26 121.3 166 50.0
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 7.9e-26 121.3 161 51.6
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.8e-25 120.2 161 48.4
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.5e-24 117.1 85 74.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 3.3e-24 115.9 155 48.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 4.4e-24 115.5 161 49.1
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.4e-24 115.5 161 49.1
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 5.7e-24 115.2 103 65.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.7e-24 114.4 161 49.1
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 9.7e-24 114.4 161 49.1
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 9.7e-24 114.4 164 53.0
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 9.7e-24 114.4 164 52.4
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-23 114.0 121 57.9
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-23 113.2 162 47.5
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 2.8e-23 112.8 80 73.8
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 4.1e-22 109.0 160 48.1
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 5.3e-22 108.6 100 63.0
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 7.0e-22 108.2 143 49.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 7.0e-22 108.2 110 57.3
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.5e-21 105.9 143 45.5
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 4.5e-21 105.5 82 69.5
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.7e-20 103.6 96 59.4
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.7e-20 103.6 82 69.5
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.2e-18 97.4 65 75.4
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.8e-17 93.6 63 76.2
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.4e-14 84.0 81 58.0
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 7.0e-14 81.6 80 57.5
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.1e-11 74.3 85 51.8
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.2e-11 72.8 84 50.0
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 4.0e-09 65.9 95 42.1


User provided reference genes

Program Settings