Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g108480 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.6e-123 444.9 217 100.0
Ah.03g136690 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.4e-26 124.0 223 35.9
Ah.16g108460 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.2e-23 112.5 148 43.9
AUR62020371 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.7e-21 104.8 223 35.9
Ah.06g182180 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.9e-20 103.6 219 35.6
AUR62015889 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.6e-19 100.5 229 34.1
AUR62035401 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.8e-19 99.0 204 36.3
AUR62010291 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.1e-18 97.8 164 37.2
EL10Ac3g05678 Beta vulgaris HOM05D005485 ORTHO05D007343 2.4e-18 96.7 146 39.0
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.4e-17 92.8 225 32.9
EL10Ac3g07381 Beta vulgaris HOM05D005485 ORTHO05D007343 4.5e-17 92.4 216 31.0
AUR62015844 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.0e-16 91.3 222 33.3
AUR62020486 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.8e-16 89.4 230 33.0
AUR62020370 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.0e-16 89.0 223 34.5
Ah.14g079940 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-15 87.8 227 30.8
EL10Ac4g07717 Beta vulgaris HOM05D005485 ORTHO05D007343 1.1e-15 87.8 230 32.6
Ah.02g116550 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.2e-15 86.3 231 31.6
AUR62020556 Chenopodium quinoa HOM05D005485 ORTHO05D026998 1.6e-14 84.0 223 29.6
Ah.14g079930 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.1e-14 83.6 217 31.8
EL10Ac4g07712 Beta vulgaris HOM05D005485 ORTHO05D007343 2.7e-14 83.2 222 32.4
EL10Ac4g08009 Beta vulgaris HOM05D005485 ORTHO05D007343 2.7e-14 83.2 206 31.1
Ah.02g116580 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.1e-14 82.0 231 33.3
AUR62039544 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.1e-14 82.0 219 33.8
AUR62020484 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.8e-13 80.5 149 36.2
Ah.07g208890 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.0e-13 79.7 216 30.1
EL10Ac4g07973 Beta vulgaris HOM05D005485 ORTHO05D026998 3.0e-13 79.7 213 31.5
EL10Ac4g07975 Beta vulgaris HOM05D005485 ORTHO05D007343 1.1e-12 77.8 157 34.4
Sc16g0006400 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.6e-12 76.6 157 31.8
Ah.12g062530 Amaranthus hybridus HOM05D000264 ORTHO05D000152 3.3e-12 76.3 245 27.8
EL10Ac4g08005 Beta vulgaris HOM05D005485 ORTHO05D007343 3.3e-12 76.3 138 37.0
AUR62035969 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.7e-12 75.5 215 31.2
EL10Ac3g06720 Beta vulgaris HOM05D000264 ORTHO05D000152 1.7e-11 73.9 214 28.5
AUR62044278 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.7e-11 73.9 219 31.5
AUR62000944 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.8e-11 72.4 235 24.3
AUR62035354 Chenopodium quinoa HOM05D000264 ORTHO05D000152 8.2e-11 71.6 133 33.8
Ah.06g182120 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.1e-10 69.7 184 33.2
AUR62020336 Chenopodium quinoa HOM05D003198 ORTHO05D003716 4.1e-10 69.3 195 30.3
AUR62044254 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.1e-10 69.3 208 31.7
AUR62034285 Chenopodium quinoa HOM05D005485 ORTHO05D007343 5.3e-10 68.9 232 28.4
EL10Ac6g15588 Beta vulgaris HOM05D005485 ORTHO05D007343 9.1e-10 68.2 213 30.5
AUR62014162 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.6e-09 66.6 109 35.8
Ah.12g053550 Amaranthus hybridus HOM05D005485 ORTHO05D007343 5.9e-09 65.5 177 30.5
EL10Ac2g04709 Beta vulgaris HOM05D007624 ORTHO05D010285 5.9e-09 65.5 132 28.8
AUR62017633 Chenopodium quinoa HOM05D007624 ORTHO05D000152 7.7e-09 65.1 148 29.1
TAR627G0592 Trochodendron aralioides HOM05D000264 ORTHO05D000152 7.7e-09 65.1 138 33.3
Hund23311 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.0e-08 64.7 140 37.9
AUR62020317 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.7e-08 63.9 150 30.7
AUR62017745 Chenopodium quinoa HOM05D007624 ORTHO05D010285 2.9e-08 63.2 145 29.7
Hund05635 Selenicereus undatus HOM05D007624 ORTHO05D010285 3.8e-08 62.8 149 30.9
Hund23385 Selenicereus undatus HOM05D005485 ORTHO05D007343 6.5e-08 62.0 101 37.6
TAR362G0859 Trochodendron aralioides HOM05D000097 ORTHO05D000041 6.5e-08 62.0 129 30.2
Hund05634 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.1e-07 61.2 154 31.8
Ah.12g053500 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.5e-07 60.1 178 31.5
Sc05g0005310 Simmondsia chinensis HOM05D005485 ORTHO05D007343 3.2e-07 59.7 177 29.9
Hund23316 Selenicereus undatus HOM05D005485 ORTHO05D007343 4.2e-07 59.3 208 30.8
Sc16g0006480 Simmondsia chinensis HOM05D005485 ORTHO05D007343 5.5e-07 58.9 122 30.3
Ah.11g050890 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.2e-06 57.8 202 25.2
AUR62037233 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.6e-06 57.4 161 26.7
AUR62029296 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.1e-06 57.0 94 42.6
Ah.06g183040 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.7e-06 56.6 217 26.3
EL10Ac9g22886 Beta vulgaris HOM05D007624 ORTHO05D010285 4.7e-06 55.8 152 28.3
Hund06834 Selenicereus undatus HOM05D007624 ORTHO05D010285 7.9e-06 55.1 129 29.5
Sc03g0009040 Simmondsia chinensis HOM05D005485 ORTHO05D007343 7.9e-06 55.1 133 32.3


User provided reference genes

Program Settings