Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g106080 Amaranthus hybridus HOM05D002712 ORTHO05D003032 5.4e-49 197.2 91 100.0
Dinv16883 Davidia involucrata HOM05D002712 ORTHO05D003032 1.2e-16 89.7 52 80.8
Dinv16882 Davidia involucrata HOM05D002712 ORTHO05D003032 2.1e-16 89.0 59 71.2
Gorai.003G111300 Gossypium raimondii HOM05D002712 ORTHO05D003032 2.7e-16 88.6 45 91.1
AUR62039180 Chenopodium quinoa HOM05D002712 ORTHO05D003032 3.6e-16 88.2 48 83.3
Cpa.g.sc13.235 Carica papaya HOM05D002712 ORTHO05D003032 1.4e-15 86.3 45 84.4
MD07G1245900 Malus domestica HOM05D002712 ORTHO05D003032 1.3e-13 79.7 45 77.8
CDE06G0566 Ceratophyllum demersum HOM05D002712 ORTHO05D003032 2.4e-12 75.5 45 75.6
Ca_00240_v3 Cicer arietinum L. HOM05D002712 ORTHO05D003032 3.1e-12 75.1 35 94.3
MD07G1243800 Malus domestica HOM05D002712 ORTHO05D003032 3.1e-12 75.1 65 60.0
TPR.G15132 Trifolium pratense HOM05D002712 ORTHO05D003032 3.1e-12 75.1 35 94.3
Nn6g33771 Nelumbo nucifera HOM05D002712 ORTHO05D003032 5.3e-12 74.3 45 71.1
Medtr4g035650 Medicago truncatula HOM05D002712 ORTHO05D003032 9.1e-12 73.6 35 91.4
Atru.chr6.1981 Acer truncatum HOM05D002712 ORTHO05D003032 2.0e-11 72.4 45 75.6
Atru.chr6.2005 Acer truncatum HOM05D002712 ORTHO05D003032 2.0e-11 72.4 45 75.6
MSTRG.8401 Avicennia marina HOM05D002712 ORTHO05D003032 2.6e-11 72.0 35 91.4
SalBow3G0611 Salvia bowleyana HOM05D002712 ORTHO05D003032 2.6e-11 72.0 35 91.4
Hma1.2p1_0502F.1_g167860 Hydrangea macrophylla HOM05D002712 ORTHO05D003032 4.5e-11 71.2 35 88.6
Hma1.2p1_2119F.1_g314390 Hydrangea macrophylla HOM05D002712 ORTHO05D003032 4.5e-11 71.2 35 88.6
Lj8A48T41 Lonicera japonica HOM05D002712 ORTHO05D003032 4.5e-11 71.2 35 88.6
Psat0s883g0080 Pisum sativum HOM05D002712 ORTHO05D003032 5.9e-11 70.9 35 88.6
PGR042G3357 Punica granatum HOM05D002712 ORTHO05D003032 5.9e-11 70.9 35 88.6
Ciclev10032174m.g Citrus clementina HOM05D002712 ORTHO05D003032 7.7e-11 70.5 35 91.4
Rhsim03G0158800 Rhododendron simsii HOM05D002712 ORTHO05D003032 1.7e-10 69.3 35 85.7
vmacro06847 Vaccinium macrocarpon HOM05D002712 ORTHO05D003032 1.7e-10 69.3 35 85.7
Thecc.03G145800 Theobroma cacao HOM05D002712 ORTHO05D003032 2.2e-10 68.9 35 88.6
Cfa013600 Carpinus fangiana HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 85.7
Cc00_g24330 Coffea canephora HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 85.7
Haze_22222 Corylus avellana HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 85.7
Migut.F00540 Erythranthe guttata HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 91.4
Hund12419 Selenicereus undatus HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 88.6
THA.LOC104801670 Tarenaya hassleriana HOM05D002712 ORTHO05D003032 2.9e-10 68.6 35 85.7
CiPaw.08G042600 Carya illinoinensis HOM05D002712 ORTHO05D003032 3.8e-10 68.2 35 85.7
Eucgr.A02931 Eucalyptus grandis HOM05D002712 ORTHO05D003032 3.8e-10 68.2 35 82.9
Gohir.A03G060900 Gossypium hirsutum HOM05D002712 ORTHO05D003032 3.8e-10 68.2 35 88.6
Gohir.D03G105200 Gossypium hirsutum HOM05D002712 ORTHO05D003032 3.8e-10 68.2 35 88.6
Lj3g0014569 Lotus japonicus HOM05D002712 ORTHO05D003032 5.0e-10 67.8 35 85.7
arahy.Tifrunner.gnm1.ann1.L1TS6G Arachis hypogaea HOM05D002712 ORTHO05D003032 6.5e-10 67.4 35 85.7
EL10Ac2g03315 Beta vulgaris HOM05D002712 ORTHO05D003032 6.5e-10 67.4 45 68.9
COL.COLO4_37312 Corchorus olitorius HOM05D002712 ORTHO05D003032 6.5e-10 67.4 35 82.9
Nitab4.5_0000103g0370 Nicotiana tabacum HOM05D002712 ORTHO05D003032 6.5e-10 67.4 35 82.9
AUR62032087 Chenopodium quinoa HOM05D002712 ORTHO05D003032 8.5e-10 67.0 35 85.7
Solyc03g093830.3 Solanum lycopersicum HOM05D002712 ORTHO05D003032 8.5e-10 67.0 35 85.7
Sopen03g024720 Solanum pennellii HOM05D002712 ORTHO05D003032 8.5e-10 67.0 35 85.7
TAR629G1116 Trochodendron aralioides HOM05D002712 ORTHO05D003032 8.5e-10 67.0 35 80.0
Glyma.09G233300 Glycine max HOM05D002712 ORTHO05D003032 1.1e-09 66.6 35 82.9
Glyma.12G003500 Glycine max HOM05D002712 ORTHO05D003032 1.1e-09 66.6 35 82.9
TWI39G0832 Tripterygium wilfordii HOM05D002712 ORTHO05D003032 1.1e-09 66.6 35 85.7
Aqoxy3G02667 Aquilegia oxysepala HOM05D002712 ORTHO05D003032 1.4e-09 66.2 35 80.0
ClCG01G004840 Citrullus lanatus HOM05D002712 ORTHO05D003032 1.9e-09 65.9 35 85.7
CsaV3_5G005060 Cucumis sativus L. HOM05D002712 ORTHO05D003032 1.9e-09 65.9 35 85.7
DCAR_020166 Daucus carota HOM05D002712 ORTHO05D003032 1.9e-09 65.9 35 80.0
GSVIVG01013852001 Vitis vinifera HOM05D002712 ORTHO05D003032 1.9e-09 65.9 35 82.9
Actinidia31658 Actinidia chinensis HOM05D002712 ORTHO05D003032 2.5e-09 65.5 35 80.0
Gohir.D07G048600 Gossypium hirsutum HOM05D002712 ORTHO05D003032 2.5e-09 65.5 35 82.9
arahy.Tifrunner.gnm1.ann1.T0XEU7 Arachis hypogaea HOM05D002712 ORTHO05D003032 3.2e-09 65.1 35 82.9
Manes.14G040800 Manihot esculenta HOM05D002712 ORTHO05D003032 3.2e-09 65.1 35 82.9
Nitab4.5_0010058g0020 Nicotiana tabacum HOM05D002712 ORTHO05D003032 3.2e-09 65.1 35 80.0
Potri.012G114200 Populus trichocarpa HOM05D002712 ORTHO05D003032 3.2e-09 65.1 35 82.9
Peaxi162Scf00073g01726 Petunia axillaris HOM05D002712 ORTHO05D003032 4.2e-09 64.7 35 80.0
QL09p027448 Quercus lobata HOM05D002712 ORTHO05D003032 4.2e-09 64.7 35 80.0
Rhsim03G0158100 Rhododendron simsii HOM05D002712 ORTHO05D003032 4.2e-09 64.7 36 80.6
Sabra12G0083100 Salix brachista HOM05D002712 ORTHO05D003032 4.2e-09 64.7 35 82.9
VMungo1127G2313 Vigna mungo HOM05D002712 ORTHO05D003032 4.2e-09 64.7 35 80.0
Gohir.A07G044100 Gossypium hirsutum HOM05D002712 ORTHO05D003032 5.5e-09 64.3 35 80.0
Pp3c19_22560 Physcomitrium patens HOM05D002712 ORTHO05D003032 5.5e-09 64.3 48 54.2
THA.LOC104818298 Tarenaya hassleriana HOM05D002712 ORTHO05D003032 5.5e-09 64.3 35 82.9
FvH4_7g26730 Fragaria vesca HOM05D002712 ORTHO05D003032 7.2e-09 63.9 35 80.0
FAN01G1642 Fragaria x ananassa HOM05D002712 ORTHO05D003032 7.2e-09 63.9 35 80.0
FAN03G3365 Fragaria x ananassa HOM05D002712 ORTHO05D003032 7.2e-09 63.9 35 80.0
FAN06G2179 Fragaria x ananassa HOM05D002712 ORTHO05D003032 7.2e-09 63.9 35 80.0
Sed0017336 Sechium edule HOM05D002712 ORTHO05D003032 7.2e-09 63.9 35 82.9
Duzib205G0930 Durio zibethinus HOM05D002712 ORTHO05D003032 9.4e-09 63.5 35 82.9
GSVIVG01013859001 Vitis vinifera HOM05D002712 ORTHO05D003032 9.4e-09 63.5 35 80.0
Zm00001eb249060 Zea mays HOM05D002712 ORTHO05D003032 9.4e-09 63.5 35 80.0
CAN.G297.1 Capsicum annuum HOM05D002712 ORTHO05D003032 1.2e-08 63.2 35 80.0
MELO3C005449.2 Cucumis melo HOM05D002712 ORTHO05D003032 1.2e-08 63.2 35 82.9
HanXRQChr14g0461081 Helianthus annuus HOM05D002712 ORTHO05D003032 1.2e-08 63.2 35 74.3
Lsat_1_v5_gn_2_127180 Lactuca sativa HOM05D002712 ORTHO05D003032 1.2e-08 63.2 35 74.3
DCAR_009463 Daucus carota HOM05D002712 ORTHO05D003032 1.6e-08 62.8 35 77.1
Manes.14G040300 Manihot esculenta HOM05D002712 ORTHO05D003032 1.6e-08 62.8 35 80.0
Gorai.001G051800 Gossypium raimondii HOM05D002712 ORTHO05D003032 2.1e-08 62.4 35 80.0
Os02g0651300 Oryza sativa ssp. japonica HOM05D002712 ORTHO05D003032 2.1e-08 62.4 35 77.1
CiPaw.07G183400 Carya illinoinensis HOM05D002712 ORTHO05D003032 2.7e-08 62.0 35 74.3
ECA238G4179 Erigeron canadensis HOM05D002712 ORTHO05D003032 2.7e-08 62.0 35 71.4
Phvul.011G004200 Phaseolus vulgaris HOM05D002712 ORTHO05D003032 2.7e-08 62.0 35 77.1
vmacro07444 Vaccinium macrocarpon HOM05D002712 ORTHO05D003032 2.7e-08 62.0 48 54.2
Sc09g0007810 Simmondsia chinensis HOM05D002712 ORTHO05D003032 3.6e-08 61.6 34 79.4
CSS0027087 Camellia sinensis var. sinensis HOM05D002712 ORTHO05D003032 4.7e-08 61.2 35 77.1
Migut.F01209 Erythranthe guttata HOM05D002712 ORTHO05D003032 4.7e-08 61.2 35 77.1
FAN10G1911 Fragaria x ananassa HOM05D002712 ORTHO05D003032 4.7e-08 61.2 35 77.1
Manes.06G130100 Manihot esculenta HOM05D002712 ORTHO05D003032 4.7e-08 61.2 35 77.1
Dinv34541 Davidia involucrata HOM05D002712 ORTHO05D003032 6.1e-08 60.8 35 71.4
Actinidia13622 Actinidia chinensis HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 74.3
MD07G1243900 Malus domestica HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 77.1
MD07G1245000 Malus domestica HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 77.1
MD07G1245500 Malus domestica HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 74.3
Oeu006078.1 Olea europaea HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 74.3
SGA_v2.0_scaffold44G16588 Striga asiatica HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 77.1
TAR375G0069 Trochodendron aralioides HOM05D002712 ORTHO05D003032 7.9e-08 60.5 33 78.8
unitig_0.g264 Utricularia gibba HOM05D002712 ORTHO05D003032 7.9e-08 60.5 35 71.4
CANSAT56G1360 Cannabis sativa HOM05D002712 ORTHO05D003032 1.0e-07 60.1 35 74.3
Lj5g0021688 Lotus japonicus HOM05D002712 ORTHO05D003032 1.0e-07 60.1 48 52.1
Lalb_Chr15g0080001 Lupinus albus HOM05D002712 ORTHO05D003032 1.0e-07 60.1 34 76.5
Carub.0008s2237 Capsella rubella HOM05D002712 ORTHO05D003032 1.4e-07 59.7 35 74.3
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 1.8e-07 59.3 47 53.2
HPP92_014642 Vanilla planifolia HOM05D002712 ORTHO05D003032 1.8e-07 59.3 36 69.4
MD07G1241900 Malus domestica HOM05D002712 ORTHO05D003032 2.3e-07 58.9 34 76.5
Nn1g00775 Nelumbo nucifera HOM05D002712 ORTHO05D003032 3.0e-07 58.5 35 80.0
SEGI_19748 Sequoiadendron giganteum HOM05D002712 ORTHO05D003032 3.0e-07 58.5 48 47.9
MD14G1029300 Malus domestica HOM05D002712 ORTHO05D003032 3.9e-07 58.2 45 55.6
PSO675G4492 Papaver somniferum HOM05D002712 ORTHO05D003032 3.9e-07 58.2 35 68.6
PSO732G0346 Papaver somniferum HOM05D002712 ORTHO05D003032 3.9e-07 58.2 35 68.6
MD07G1243400 Malus domestica HOM05D002712 ORTHO05D003032 5.1e-07 57.8 34 76.5
MD07G1244500 Malus domestica HOM05D002712 ORTHO05D003032 5.1e-07 57.8 34 76.5
MD01G1175600 Malus domestica HOM05D002712 ORTHO05D003032 6.7e-07 57.4 35 74.3
AT5G61670 Arabidopsis thaliana HOM05D002712 ORTHO05D003032 8.8e-07 57.0 35 71.4
Sp2g24880 Schrenkiella parvula HOM05D002712 ORTHO05D003032 8.8e-07 57.0 35 71.4
Nitab4.5_0001875g0050 Nicotiana tabacum HOM05D002712 ORTHO05D003032 1.1e-06 56.6 45 55.6
RcHm_v2.0_Chr1g0373321 Rosa chinensis HOM05D002712 ORTHO05D003032 1.1e-06 56.6 34 73.5
SGA_v2.0_scaffold184G39983 Striga asiatica HOM05D002712 ORTHO05D003032 1.5e-06 56.2 48 50.0
Thhalv10004649m.g Eutrema salsugineum HOM05D002712 ORTHO05D003032 2.0e-06 55.8 35 71.4
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 7.4e-06 53.9 46 52.2


User provided reference genes

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