Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 6.2e-115 417.5 221 100.0
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 5.0e-72 275.0 208 75.5
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 1.2e-70 270.4 218 72.9
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 9.1e-58 227.6 209 61.7
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 7.2e-47 191.4 229 52.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 9.5e-47 191.0 253 46.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.2e-46 190.7 218 50.9
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 2.7e-46 189.5 222 51.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 3.6e-46 189.1 219 52.1
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 6.1e-46 188.3 237 52.3
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.3e-45 186.4 253 49.4
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 5.2e-45 185.3 243 50.2
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 6.8e-45 184.9 249 50.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 6.8e-45 184.9 239 50.6
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.2e-44 184.1 249 46.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 2.0e-44 183.3 256 47.7
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.6e-44 183.0 230 50.0
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 7.5e-44 181.4 242 50.4
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.3e-43 180.6 238 48.7
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.2e-43 179.9 237 48.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.8e-43 179.5 141 69.5
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.9e-43 178.7 233 48.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 6.3e-43 178.3 239 49.4
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 6.3e-43 178.3 256 47.7
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 1.1e-42 177.6 242 49.6
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.4e-42 177.2 236 49.2
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.8e-42 176.8 237 51.1
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 4.1e-42 175.6 249 47.4
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 9.2e-42 174.5 195 53.3
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 1.2e-41 174.1 263 46.4
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 1.6e-41 173.7 250 44.8
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.7e-41 172.9 222 49.1
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 3.5e-41 172.6 228 50.9
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 3.5e-41 172.6 231 48.1
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 3.5e-41 172.6 252 45.6
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 4.5e-41 172.2 246 48.4
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 1.3e-40 170.6 235 47.7
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 1.3e-40 170.6 203 52.7
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.3e-40 170.6 231 47.2
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.9e-40 169.5 259 46.3
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 2.9e-40 169.5 238 47.9
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 3.8e-40 169.1 209 48.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.0e-40 168.7 250 47.2
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 6.6e-40 168.3 203 50.7
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 8.6e-40 167.9 252 46.4
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.1e-39 167.5 259 45.9
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.1e-39 167.5 259 45.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 1.9e-39 166.8 190 53.2
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.9e-39 166.8 252 47.2
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.9e-39 166.8 206 51.9
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.8e-38 162.9 142 64.8
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.8e-38 162.9 232 46.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 3.6e-38 162.5 241 46.1
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 4.7e-38 162.2 148 62.8
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 6.1e-38 161.8 185 54.1
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 6.1e-38 161.8 261 45.2
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.0e-37 161.0 255 45.1
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 1.4e-37 160.6 243 46.9
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.8e-37 160.2 211 49.8
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.3e-37 159.8 127 66.1
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 3.0e-37 159.5 150 58.7
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 3.0e-37 159.5 249 45.4
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 4.0e-37 159.1 138 63.0
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 6.8e-37 158.3 234 46.6
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 6.8e-37 158.3 114 71.1
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 6.8e-37 158.3 114 71.1
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 6.8e-37 158.3 114 71.1
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 6.8e-37 158.3 114 71.1
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.8e-37 158.3 104 77.9
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 6.8e-37 158.3 104 77.9
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 8.9e-37 157.9 149 60.4
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 8.9e-37 157.9 145 60.7
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-36 157.1 182 50.5
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-36 157.1 182 50.5
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.5e-36 157.1 172 52.9
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.0e-36 156.8 156 57.1
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.0e-36 156.8 173 51.4
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 2.0e-36 156.8 242 46.3
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 9.8e-36 154.5 237 44.7
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.3e-35 154.1 152 58.6
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 1.3e-35 154.1 250 44.0
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 2.2e-35 153.3 116 68.1
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 2.2e-35 153.3 256 43.4
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 2.9e-35 152.9 226 46.5
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 3.7e-35 152.5 173 55.5
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 3.7e-35 152.5 258 42.6
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 6.4e-35 151.8 230 42.2
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.2e-34 149.4 147 58.5
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 7.0e-34 148.3 235 43.4
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 2.0e-33 146.7 229 45.4
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.0e-33 146.7 259 42.1
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.5e-33 146.0 171 53.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 3.5e-33 146.0 242 43.4
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 5.9e-33 145.2 257 42.0
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 5.0e-32 142.1 130 60.8
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 6.6e-32 141.7 108 68.5
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.2e-30 137.5 163 50.9
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 1.8e-29 133.7 222 45.0
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 8.9e-29 131.3 207 42.5
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 1.5e-28 130.6 253 39.5
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.2e-27 126.7 165 49.7
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 2.2e-27 126.7 218 42.2
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 2.7e-25 119.8 161 49.1
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 1.7e-24 117.1 83 68.7
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 1.5e-23 114.0 186 40.9
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 3.7e-19 99.4 169 42.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 8.3e-19 98.2 194 39.2
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 1.9e-18 97.1 77 68.8
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 1.5e-07 60.8 159 34.6
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.6e-06 57.4 116 36.2


User provided reference genes

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