Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g103550 Amaranthus hybridus HOM05D029478 ORTHO05D015825 2.7e-169 598.6 299 100.0
AUR62001048 Chenopodium quinoa HOM05D022875 ORTHO05D015825 4.9e-30 136.0 237 33.8
AUR62004916 Chenopodium quinoa HOM05D029478 ORTHO05D015825 7.3e-26 122.1 221 35.3
AUR62044105 Chenopodium quinoa HOM05D022875 ORTHO05D015825 2.5e-18 97.1 207 32.4
AUR62001041 Chenopodium quinoa HOM05D029478 ORTHO05D015825 2.0e-15 87.4 131 36.6
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.3e-14 84.7 227 28.6
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.9e-14 82.8 227 28.6
EL10Ac5g11310 Beta vulgaris HOM05D000007 ORTHO05D015825 6.0e-12 75.9 221 29.9
QL04p026176 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-11 74.3 223 24.7
PGSC0003DMG400013520 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.3e-10 69.7 199 27.6
Cfa000449 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.6e-10 69.3 228 28.5
AUR62001055 Chenopodium quinoa HOM05D022875 ORTHO05D015825 9.6e-10 68.6 145 31.0
CiPaw.08G159300 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.3e-09 68.2 235 27.7
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 2.8e-09 67.0 226 25.2
Peaxi162Scf00047g00088 Petunia axillaris HOM05D000007 ORTHO05D000017 2.8e-09 67.0 210 28.6
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 3.6e-09 66.6 225 24.9
QL04p026212 Quercus lobata HOM05D000007 ORTHO05D000039 3.6e-09 66.6 223 23.8
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 4.8e-09 66.2 191 25.1
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.8e-09 66.2 218 25.2
Cfa000452 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.8e-08 64.3 223 27.8
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.4e-08 63.9 231 26.4
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.4e-08 63.9 221 28.5
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.1e-08 63.5 231 26.0
Nitab4.5_0000217g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.1e-08 63.5 229 24.9
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.0e-08 63.2 225 26.2
Dinv44144 Davidia involucrata HOM05D000007 ORTHO05D000039 5.3e-08 62.8 188 26.1
Nitab4.5_0000941g0210 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.3e-08 62.8 189 25.9
EL10Ac3g06684 Beta vulgaris HOM05D000007 ORTHO05D000017 9.0e-08 62.0 176 28.4
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.0e-08 62.0 236 25.4
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.2e-07 61.6 218 26.6
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.2e-07 61.6 218 26.6
CSS0036577 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.5e-07 61.2 220 29.1
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.5e-07 61.2 231 27.7
FAN14G5293 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 61.2 248 23.8
Lj1P665T16 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-07 61.2 200 28.5
Peaxi162Scf01070g00125 Petunia axillaris HOM05D000007 ORTHO05D000017 1.5e-07 61.2 212 26.9
COL.COLO4_10297 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.0e-07 60.8 229 25.8
Peaxi162Scf00421g00008 Petunia axillaris HOM05D000007 ORTHO05D000017 2.0e-07 60.8 207 26.1
Dinv04466 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-07 60.5 205 24.9
FvH4_6g16041 Fragaria vesca HOM05D000007 ORTHO05D000039 2.6e-07 60.5 245 24.1
PSO017G2267 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-07 60.5 246 27.6
Cfa000451 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.4e-07 60.1 221 28.5
PGSC0003DMG400013491 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.4e-07 59.7 198 26.8
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 4.4e-07 59.7 215 28.8
AUR62004897 Chenopodium quinoa HOM05D000007 ORTHO05D015825 5.8e-07 59.3 112 32.1
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 5.8e-07 59.3 228 25.4
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 5.8e-07 59.3 212 26.9
Manes.02G207000 Manihot esculenta HOM05D000007 ORTHO05D000039 5.8e-07 59.3 229 24.0
TWI31G1434 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.8e-07 59.3 235 26.4
Nitab4.5_0000191g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.6e-07 58.9 225 27.6
Peaxi162Scf00610g00015 Petunia axillaris HOM05D000007 ORTHO05D000017 7.6e-07 58.9 205 26.3
Nitab4.5_0004601g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.9e-07 58.5 166 27.1
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.7e-06 57.8 220 26.8
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-06 57.8 246 24.8
Nitab4.5_0002398g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-06 57.8 148 29.1
Nitab4.5_0004974g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-06 57.8 214 24.8
PSO384G0329 Papaver somniferum HOM05D000007 ORTHO05D000017 1.7e-06 57.8 218 24.8
PSO384G0684 Papaver somniferum HOM05D000007 ORTHO05D000017 1.7e-06 57.8 218 26.1
QL04p019206 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.8 216 24.5
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.8 255 21.2
QL08p042875 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.8 100 32.0
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 2.2e-06 57.4 207 23.2
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-06 57.0 222 26.1
Nitab4.5_0002978g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.9e-06 57.0 207 27.5
Aqoxy2G00678 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 4.9e-06 56.2 273 23.8
Haze_03075 Corylus avellana HOM05D000007 ORTHO05D000039 4.9e-06 56.2 207 24.2
Lj8C10T4 Lonicera japonica HOM05D000007 ORTHO05D000039 4.9e-06 56.2 235 25.1
Nitab4.5_0001503g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.4e-06 55.8 151 27.8
PGSC0003DMG400021943 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.4e-06 55.8 159 28.9
Aqoxy7G03525 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 8.4e-06 55.5 282 25.5
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 8.4e-06 55.5 188 25.0
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 8.4e-06 55.5 226 24.8


User provided reference genes

Program Settings