Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 2.1e-44 182.2 105 100.0
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.4e-27 126.3 106 67.0
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.7e-25 119.4 102 66.7
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 2.5e-21 105.5 97 59.8
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.2e-21 104.0 111 57.7
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 2.1e-20 102.4 102 58.8
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 3.6e-20 101.7 102 59.8
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 6.1e-20 100.9 99 58.6
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 8.0e-20 100.5 98 58.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 4.0e-19 98.2 105 60.0
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 1.2e-18 96.7 107 56.1
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.2e-18 96.7 107 56.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.5e-18 96.3 82 62.2
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.5e-18 96.3 107 55.1
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.6e-18 95.5 111 49.5
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 3.4e-18 95.1 104 56.7
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 4.4e-18 94.7 101 57.4
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 5.7e-18 94.4 98 56.1
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 5.7e-18 94.4 104 57.7
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 7.5e-18 94.0 102 54.9
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 9.8e-18 93.6 104 54.8
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 9.8e-18 93.6 108 50.0
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 9.8e-18 93.6 98 57.1
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 1.3e-17 93.2 102 54.9
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 2.2e-17 92.4 108 59.3
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 4.8e-17 91.3 100 57.0
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 4.8e-17 91.3 112 50.0
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.8e-17 91.3 108 49.1
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.8e-17 91.3 102 52.9
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 4.8e-17 91.3 100 51.0
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 6.3e-17 90.9 102 54.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 8.3e-17 90.5 101 54.5
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 8.3e-17 90.5 104 54.8
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.1e-16 90.1 104 54.8
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 1.1e-16 90.1 98 55.1
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.1e-16 90.1 111 55.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.1e-16 90.1 98 52.0
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.1e-16 90.1 103 53.4
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 1.4e-16 89.7 99 52.5
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 1.4e-16 89.7 99 52.5
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.4e-16 89.7 100 54.0
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.4e-16 89.7 111 55.0
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.8e-16 89.4 101 55.4
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 1.8e-16 89.4 106 52.8
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.4e-16 89.0 95 55.8
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.4e-16 89.0 101 53.5
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.4e-16 89.0 108 50.9
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.4e-16 89.0 108 50.9
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 2.4e-16 89.0 104 50.0
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.1e-16 88.6 108 50.0
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 4.1e-16 88.2 111 50.5
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 7.0e-16 87.4 104 54.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 7.0e-16 87.4 98 52.0
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 7.0e-16 87.4 108 50.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 1.2e-15 86.7 104 51.0
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 1.2e-15 86.7 105 51.4
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.0e-15 85.9 101 51.5
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.7e-15 85.5 100 58.0
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 2.7e-15 85.5 108 52.8
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 3.5e-15 85.1 104 51.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 3.5e-15 85.1 104 51.0
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 4.5e-15 84.7 102 52.0
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 4.5e-15 84.7 109 53.2
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 5.9e-15 84.3 103 58.3
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.0e-14 83.6 103 52.4
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.3e-14 83.2 109 53.2
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.7e-14 82.8 106 55.7
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 2.2e-14 82.4 99 51.5
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.2e-14 82.4 99 53.5
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.9e-14 82.0 104 51.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 3.8e-14 81.6 99 60.6
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 3.8e-14 81.6 112 48.2
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.8e-14 81.6 100 53.0
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.8e-14 81.6 107 50.5
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 5.0e-14 81.3 106 53.8
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 5.0e-14 81.3 58 67.2
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 5.0e-14 81.3 61 62.3
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 5.0e-14 81.3 91 53.8
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.5e-14 80.9 78 59.0
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.5e-14 80.9 100 50.0
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 6.5e-14 80.9 106 50.9
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 8.5e-14 80.5 108 50.0
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.1e-13 80.1 56 67.9
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 1.1e-13 80.1 103 53.4
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.9e-13 79.3 108 56.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.5e-13 79.0 113 46.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 2.5e-13 79.0 102 50.0
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 4.2e-13 78.2 102 53.9
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.2e-13 78.2 101 47.5
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 4.2e-13 78.2 47 72.3
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-12 76.6 48 75.0
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 2.1e-12 75.9 106 47.2
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 4.7e-12 74.7 84 56.0
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 4.7e-12 74.7 46 76.1
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 6.1e-12 74.3 79 59.5
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.1e-12 74.3 50 70.0
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.1e-12 74.3 50 70.0
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.0e-11 73.6 95 47.4
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.0e-11 73.6 112 48.2
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.4e-11 73.2 59 62.7
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 1.8e-11 72.8 84 53.6
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 4.0e-11 71.6 133 43.6
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 5.2e-11 71.2 102 49.0
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 8.8e-11 70.5 80 55.0
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 8.8e-11 70.5 101 45.5
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 9.8e-10 67.0 57 57.9
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 2.2e-09 65.9 108 44.4
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.8e-09 65.5 41 70.7
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 4.1e-08 61.6 104 44.2
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 1.2e-07 60.1 83 55.4
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 4.5e-07 58.2 99 42.4
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.9e-06 55.5 97 46.4


User provided reference genes

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