Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 5.2e-96 354.4 179 100.0
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 2.5e-61 239.2 150 78.0
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 8.7e-51 204.1 174 59.2
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 5.7e-50 201.4 177 56.5
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.7e-46 189.9 164 56.1
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.2e-46 189.5 180 55.0
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 8.5e-46 187.6 165 54.5
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 8.5e-46 187.6 165 54.5
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.4e-45 186.8 168 56.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.9e-45 186.4 176 51.7
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 3.2e-45 185.7 158 55.7
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 5.5e-45 184.9 176 51.7
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 9.4e-45 184.1 178 52.2
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 1.2e-44 183.7 174 54.0
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.7e-44 182.6 173 52.6
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 3.6e-44 182.2 170 51.2
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 7.9e-44 181.0 180 51.7
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 7.9e-44 181.0 175 54.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 7.9e-44 181.0 173 52.6
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 1.4e-43 180.3 177 50.3
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 3.0e-43 179.1 185 49.7
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 3.9e-43 178.7 170 54.7
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 5.1e-43 178.3 174 52.9
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 5.1e-43 178.3 174 52.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 6.7e-43 177.9 143 58.7
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 1.5e-42 176.8 170 50.0
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 2.0e-42 176.4 174 51.1
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.0e-42 176.4 178 51.7
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 2.5e-42 176.0 169 53.8
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 3.3e-42 175.6 175 50.9
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 4.3e-42 175.3 172 51.7
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 5.7e-42 174.9 170 50.0
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 7.4e-42 174.5 179 50.3
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 2.8e-41 172.6 178 51.7
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.8e-41 172.6 175 51.4
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 3.7e-41 172.2 178 51.7
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 4.8e-41 171.8 133 62.4
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 4.8e-41 171.8 178 50.0
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 6.3e-41 171.4 171 52.0
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 8.2e-41 171.0 171 50.9
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 1.1e-40 170.6 177 53.1
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.1e-40 170.6 171 52.0
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 1.4e-40 170.2 177 48.6
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.8e-40 169.9 176 50.6
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.8e-40 169.9 177 50.3
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 3.1e-40 169.1 166 51.8
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 4.1e-40 168.7 172 50.6
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 4.1e-40 168.7 170 49.4
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 9.1e-40 167.5 133 60.2
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 1.2e-39 167.2 174 51.7
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 2.6e-39 166.0 181 49.7
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 3.4e-39 165.6 175 50.9
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.3e-38 163.7 178 46.1
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 1.3e-38 163.7 168 48.8
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.8e-38 162.2 165 50.9
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 6.5e-38 161.4 165 50.3
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 6.5e-38 161.4 136 56.6
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 8.5e-38 161.0 146 57.5
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.4e-37 160.2 165 49.7
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 2.5e-37 159.5 165 49.1
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 4.2e-37 158.7 179 46.9
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 2.7e-36 156.0 186 45.7
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.0e-35 154.1 169 49.1
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.3e-35 152.9 165 49.1
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 1.1e-34 150.6 142 53.5
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.0e-34 149.8 133 57.1
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.0e-34 149.8 171 48.5
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 3.3e-34 149.1 176 44.9
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.8e-32 143.3 164 45.7
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 5.3e-32 141.7 178 44.9
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 2.5e-29 132.9 135 48.1
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 3.2e-29 132.5 135 51.1
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 1.4e-27 127.1 169 42.6
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 2.3e-27 126.3 155 44.5
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 3.0e-27 125.9 172 38.4
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 6.7e-27 124.8 165 43.0
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 2.6e-26 122.9 174 38.5
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 2.6e-26 122.9 183 38.3
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 2.6e-26 122.9 183 38.3
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 3.3e-26 122.5 140 43.6
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 4.4e-26 122.1 143 51.0
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 4.4e-26 122.1 117 52.1
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 7.4e-26 121.3 183 40.4
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 2.2e-25 119.8 136 46.3
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.8e-25 119.4 139 46.0
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 8.2e-25 117.9 171 38.6
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.1e-24 117.5 173 37.6
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.8e-24 116.7 184 37.5
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 4.1e-24 115.5 180 37.2
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 5.3e-24 115.2 175 38.9
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.7e-22 110.2 177 39.0
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 1.7e-22 110.2 149 43.0
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 9.4e-21 104.4 116 45.7
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.8e-19 100.1 193 32.6
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 3.0e-19 99.4 176 34.7
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 7.5e-18 94.7 121 41.3
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 9.8e-18 94.4 78 57.7
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 1.6e-15 87.0 154 38.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.0e-15 86.7 154 38.3
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 5.9e-15 85.1 143 32.9
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 8.5e-14 81.3 120 40.8
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.5e-10 70.5 82 40.2
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 3.8e-06 55.8 46 56.5


User provided reference genes

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