Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g103030 Amaranthus hybridus HOM05D000062 ORTHO05D062176 5.1e-47 190.7 92 100.0
Ah.11g049140 Amaranthus hybridus HOM05D000062 ORTHO05D006089 1.3e-13 79.7 84 56.0
AUR62011754 Chenopodium quinoa HOM05D000062 ORTHO05D006089 1.1e-12 76.6 65 64.6
AUR62024598 Chenopodium quinoa HOM05D000062 ORTHO05D006089 2.4e-12 75.5 65 63.1
EL10As5g23603 Beta vulgaris HOM05D000062 ORTHO05D006089 1.6e-11 72.8 41 82.9
Ah.02g112550 Amaranthus hybridus HOM05D000062 ORTHO05D006089 4.5e-11 71.2 84 50.0
Sc17g0000220 Simmondsia chinensis HOM05D000062 ORTHO05D006089 2.9e-10 68.6 79 48.1
Hund09663 Selenicereus undatus HOM05D000062 ORTHO05D006089 6.6e-10 67.4 65 55.4
GSVIVG01035736001 Vitis vinifera HOM05D000062 ORTHO05D006089 1.0e-07 60.1 61 54.1
Zm00001eb252410 Zea mays HOM05D000062 ORTHO05D006089 1.4e-07 59.7 40 60.0
TWI32G0255 Tripterygium wilfordii HOM05D000062 ORTHO05D006089 1.8e-07 59.3 65 46.2
Zm00001eb188700 Zea mays HOM05D000062 ORTHO05D006089 2.3e-07 58.9 39 61.5
TWI60G1018 Tripterygium wilfordii HOM05D000062 ORTHO05D006089 8.9e-07 57.0 65 46.2
Aa31LG2G12850 Aethionema arabicum HOM05D000062 ORTHO05D006089 1.5e-06 56.2 43 62.8
Os02g0710900 Oryza sativa ssp. japonica HOM05D000062 ORTHO05D006089 2.6e-06 55.5 39 53.8
Sed0003548 Sechium edule HOM05D000062 ORTHO05D006089 2.6e-06 55.5 67 43.3
HPP92_000272 Vanilla planifolia HOM05D000062 ORTHO05D006089 2.6e-06 55.5 41 56.1
GSVIVG01038380001 Vitis vinifera HOM05D000062 ORTHO05D006089 4.4e-06 54.7 65 46.2
ATR0165G012 Amborella trichopoda HOM05D000062 ORTHO05D006089 5.7e-06 54.3 42 59.5
AL7G38090 Arabidopsis lyrata HOM05D000062 ORTHO05D006089 5.7e-06 54.3 43 58.1
AT4G16660 Arabidopsis thaliana HOM05D000062 ORTHO05D006089 5.7e-06 54.3 43 58.1
Carub.0007s2474 Capsella rubella HOM05D000062 ORTHO05D006089 5.7e-06 54.3 43 58.1
Thhalv10024376m.g Eutrema salsugineum HOM05D000062 ORTHO05D006089 5.7e-06 54.3 43 58.1
Sp7g15270 Schrenkiella parvula HOM05D000062 ORTHO05D006089 5.7e-06 54.3 43 58.1
CARHR223160 Cardamine hirsuta HOM05D000062 ORTHO05D006089 7.5e-06 53.9 43 55.8
Dinv17737 Davidia involucrata HOM05D000062 ORTHO05D006089 7.5e-06 53.9 42 61.9
BcaC09g50395 Brassica carinata HOM05D000076 ORTHO05D006089 9.8e-06 53.5 66 45.5
A01p20820 Brassica napus HOM05D000062 ORTHO05D006089 9.8e-06 53.5 66 45.5
C01p25980 Brassica napus HOM05D000062 ORTHO05D006089 9.8e-06 53.5 66 45.5
BolC1t02543H Brassica oleracea HOM05D000062 ORTHO05D006089 9.8e-06 53.5 66 45.5
BraA01t01991Z Brassica rapa HOM05D000062 ORTHO05D006089 9.8e-06 53.5 66 45.5


User provided reference genes

Program Settings