Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 4.7e-73 277.7 134 100.0
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.0e-64 248.4 134 88.1
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 2.8e-62 241.9 134 84.3
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-61 240.0 129 86.8
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 2.7e-57 225.3 130 77.7
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 2.7e-57 225.3 131 78.6
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.7e-57 225.3 132 76.5
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.7e-57 225.3 131 77.9
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 4.7e-57 224.6 130 76.9
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 8.0e-57 223.8 130 77.7
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 8.0e-57 223.8 130 80.0
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.8e-56 222.6 130 76.9
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.3e-56 222.2 131 74.8
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.3e-56 222.2 131 74.8
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 3.0e-56 221.9 130 77.7
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 4.0e-56 221.5 130 76.2
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 5.2e-56 221.1 130 77.7
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 5.2e-56 221.1 130 77.7
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.8e-56 220.7 134 79.1
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 6.8e-56 220.7 130 75.4
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 6.8e-56 220.7 130 78.5
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 8.8e-56 220.3 134 77.6
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.5e-55 219.5 131 75.6
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.0e-55 219.2 129 76.0
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.0e-55 219.2 131 75.6
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 2.0e-55 219.2 132 75.0
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 2.0e-55 219.2 129 76.0
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 5.7e-55 217.6 130 78.5
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 5.7e-55 217.6 131 74.8
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 5.7e-55 217.6 132 74.2
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 1.3e-54 216.5 130 76.2
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.7e-54 216.1 130 75.4
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.2e-54 215.7 130 74.6
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 2.8e-54 215.3 130 75.4
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.8e-54 215.3 130 76.2
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 2.8e-54 215.3 129 75.2
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 2.8e-54 215.3 130 76.2
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.7e-54 214.9 129 75.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 3.7e-54 214.9 129 74.4
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 3.7e-54 214.9 131 74.0
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.8e-54 214.5 130 74.6
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 4.8e-54 214.5 130 73.1
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.8e-54 214.5 130 73.1
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.8e-54 214.5 130 73.1
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 6.3e-54 214.2 132 73.5
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 8.3e-54 213.8 129 74.4
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.1e-53 213.4 130 72.3
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.1e-53 213.4 129 74.4
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 2.4e-53 212.2 129 73.6
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 2.4e-53 212.2 132 72.0
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 2.4e-53 212.2 129 72.1
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 2.4e-53 212.2 131 73.3
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 3.1e-53 211.8 130 73.1
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 7.0e-53 210.7 130 74.6
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.2e-52 209.9 129 73.6
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 1.2e-52 209.9 131 72.5
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.2e-52 209.9 130 70.8
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.2e-52 209.9 130 72.3
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 1.6e-52 209.5 130 73.8
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.0e-52 209.1 130 73.1
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.0e-52 209.1 130 70.8
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.7e-52 208.8 130 73.8
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 3.5e-52 208.4 131 71.0
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.5e-52 208.0 129 72.1
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 4.5e-52 208.0 129 72.1
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 4.5e-52 208.0 130 70.8
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 5.9e-52 207.6 132 72.0
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 5.9e-52 207.6 130 71.5
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 7.7e-52 207.2 132 72.0
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 7.7e-52 207.2 132 72.0
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 5.0e-51 204.5 132 70.5
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 1.1e-50 203.4 134 71.6
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 2.5e-50 202.2 134 66.4
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 3.2e-50 201.8 130 68.5
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 4.2e-50 201.4 130 70.0
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 5.5e-50 201.1 173 57.8
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 7.2e-50 200.7 131 68.7
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 3.6e-49 198.4 131 66.4
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 4.7e-49 198.0 130 67.7
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 6.1e-49 197.6 132 72.0
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 4.0e-48 194.9 129 69.0
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 1.5e-47 193.0 130 67.7
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 4.4e-47 191.4 130 67.7
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.4e-45 186.4 125 70.4
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.2e-44 183.3 130 63.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 6.6e-43 177.6 133 59.4
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 6.6e-43 177.6 133 59.4
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.1e-42 176.8 133 60.2
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 5.6e-42 174.5 133 58.6
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 5.6e-42 174.5 133 58.6
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 5.6e-42 174.5 133 58.6
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 2.8e-41 172.2 133 59.4
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 4.7e-41 171.4 133 60.2
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 6.1e-41 171.0 124 59.7
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.4e-40 169.9 133 59.4
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.3e-40 169.1 133 59.4
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 4.0e-40 168.3 225 41.3
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 1.2e-39 166.8 133 57.9
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.5e-39 166.4 131 61.1
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 9.8e-39 163.7 131 57.3
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 1.3e-38 163.3 126 61.1
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.4e-37 159.8 129 56.6
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 4.1e-37 158.3 133 56.4
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 1.2e-36 156.8 153 53.6
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.3e-35 153.3 135 54.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 3.9e-35 151.8 129 52.7
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 9.5e-34 147.1 129 55.0
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 9.5e-34 147.1 129 51.9
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 3.6e-33 145.2 82 76.8
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.0e-32 143.7 130 52.3
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 5.2e-32 141.4 82 74.4
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 3.4e-31 138.7 102 57.8
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 4.9e-30 134.8 133 50.4
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 7.8e-28 127.5 79 70.9
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 6.8e-24 114.4 78 64.1
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 2.9e-22 109.0 115 49.6
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 2.9e-22 109.0 64 71.9
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 3.5e-20 102.1 72 70.8
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 6.2e-17 91.3 56 64.3
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.1e-13 80.5 119 35.3
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 2.1e-12 76.3 48 72.9
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 2.7e-12 75.9 48 70.8
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.3e-10 68.9 56 53.6
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 3.6e-09 65.5 43 69.8
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 6.2e-09 64.7 50 56.0


User provided reference genes

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