Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 9.1e-63 243.4 126 100.0
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 1.2e-51 206.5 126 84.9
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.1e-47 193.4 126 81.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.7e-46 188.7 126 77.8
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 3.9e-45 184.9 111 86.5
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 7.3e-44 180.6 120 75.8
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 2.1e-43 179.1 121 76.0
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 4.7e-43 177.9 120 74.2
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 8.1e-43 177.2 114 78.1
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-42 176.4 126 73.0
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 1.4e-42 176.4 126 73.0
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.1e-42 175.3 120 72.5
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 5.2e-42 174.5 126 72.2
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 5.2e-42 174.5 117 74.4
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.8e-42 174.1 126 70.6
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 6.8e-42 174.1 126 70.6
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 6.8e-42 174.1 110 78.2
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 6.8e-42 174.1 110 78.2
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 1.5e-41 172.9 113 76.1
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 3.4e-41 171.8 124 71.0
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 3.4e-41 171.8 124 71.0
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 4.4e-41 171.4 111 78.4
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.4e-41 171.4 110 77.3
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 4.4e-41 171.4 124 72.6
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.7e-40 169.5 124 70.2
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 2.2e-40 169.1 110 77.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 3.7e-40 168.3 114 74.6
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 4.9e-40 167.9 110 78.2
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 6.4e-40 167.5 119 73.1
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 8.3e-40 167.2 114 74.6
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 8.3e-40 167.2 112 75.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 1.1e-39 166.8 112 75.0
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 1.1e-39 166.8 112 75.0
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.4e-39 166.4 120 72.5
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 1.9e-39 166.0 121 71.1
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.9e-39 166.0 114 74.6
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 3.2e-39 165.2 112 72.3
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.1e-39 164.9 121 70.2
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 4.1e-39 164.9 125 68.8
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.4e-39 164.5 126 67.5
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 7.1e-39 164.1 121 68.6
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 7.1e-39 164.1 111 74.8
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 9.2e-39 163.7 109 74.3
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 9.2e-39 163.7 120 69.2
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 2.1e-38 162.5 121 69.4
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 2.7e-38 162.2 114 71.1
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 3.5e-38 161.8 112 72.3
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 3.5e-38 161.8 115 72.2
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.6e-38 161.4 116 70.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.6e-38 161.4 116 70.7
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 4.6e-38 161.4 116 69.8
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 6.0e-38 161.0 115 70.4
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 7.8e-38 160.6 112 70.5
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 7.8e-38 160.6 110 74.5
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.3e-37 159.8 120 67.5
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.3e-37 159.8 110 73.6
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 1.7e-37 159.5 112 69.6
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.3e-37 159.1 126 66.7
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.3e-37 159.1 114 71.1
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.1e-36 156.8 114 67.5
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.5e-36 156.4 119 70.6
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.5e-36 156.4 108 71.3
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 1.9e-36 156.0 116 65.5
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 1.9e-36 156.0 119 68.1
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 1.9e-36 156.0 113 69.9
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 2.5e-36 155.6 116 67.2
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 3.3e-36 155.2 116 66.4
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 9.5e-36 153.7 107 69.2
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 1.6e-35 152.9 123 65.9
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 1.8e-34 149.4 108 67.6
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 4.0e-34 148.3 118 63.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.2e-33 146.7 110 67.3
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 5.8e-33 144.4 124 62.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 7.6e-33 144.1 102 72.5
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.6e-33 144.1 114 66.7
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 9.9e-33 143.7 123 60.2
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 5.4e-31 137.9 121 62.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 9.2e-31 137.1 104 62.5
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 9.2e-31 137.1 104 61.5
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 9.2e-31 137.1 106 61.3
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 9.2e-31 137.1 107 68.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-30 136.7 99 67.7
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 7.8e-30 134.0 93 68.8
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-29 133.7 123 61.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.0e-29 132.1 119 56.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.5e-28 129.0 78 82.1
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.3e-28 128.6 112 59.8
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 3.3e-28 128.6 111 60.4
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 4.7e-27 124.8 76 81.6
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 3.1e-26 122.1 109 56.0
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 4.0e-26 121.7 76 78.9
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-25 119.0 78 74.4
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.6e-25 119.0 78 74.4
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 2.6e-25 119.0 123 53.7
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.3e-24 116.7 120 54.2
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.8e-24 115.2 123 52.8
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.1e-23 113.6 89 64.0
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 2.4e-23 112.5 114 51.8
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 7.1e-23 110.9 89 61.8
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.0e-22 107.8 123 52.8
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.7e-21 106.3 121 51.2
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.0e-21 105.5 84 67.9
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 5.1e-21 104.8 88 60.2
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 6.6e-21 104.4 124 49.2
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.9e-20 102.8 105 47.6
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 3.3e-20 102.1 107 47.7
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 4.3e-20 101.7 93 55.9
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 5.6e-20 101.3 117 47.9
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 7.3e-20 100.9 78 70.5
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 2.1e-19 99.4 107 48.6
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 2.8e-19 99.0 70 67.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.8e-19 99.0 70 67.1
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.8e-19 99.0 70 67.1
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 2.8e-19 99.0 70 67.1
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.8e-19 99.0 70 67.1
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 3.6e-19 98.6 70 67.1
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 3.6e-19 98.6 70 67.1
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.1e-18 97.1 109 45.9
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.4e-18 96.7 70 65.7
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.4e-18 96.7 70 64.3
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.5e-17 93.2 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.5e-17 93.2 59 78.0
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 2.0e-17 92.8 88 60.2
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.3e-16 90.1 105 46.7
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.1e-14 82.8 93 44.1
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 4.6e-14 81.6 73 46.6
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 2.0e-09 66.2 47 72.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 3.4e-09 65.5 62 54.8
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.9e-08 61.6 53 54.7


User provided reference genes

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