Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g100480 Amaranthus hybridus HOM05D035932 ORTHO05D026494 1.1e-86 323.2 159 100.0
Ah.15g100450 Amaranthus hybridus HOM05D035932 ORTHO05D026494 3.6e-64 248.4 159 83.0
Ah.15g100420 Amaranthus hybridus HOM05D035932 ORTHO05D026494 6.4e-29 131.3 63 98.4
Ah.09g231660 Amaranthus hybridus HOM05D002420 ORTHO05D002422 1.9e-17 93.2 49 95.9
Actinidia35440 Actinidia chinensis HOM05D004098 ORTHO05D005215 4.8e-16 88.6 59 76.3
Rhsim04G0006500 Rhododendron simsii HOM05D004098 ORTHO05D005215 4.8e-16 88.6 59 76.3
Nitab4.5_0000611g0190 Nicotiana tabacum HOM05D004098 ORTHO05D005215 6.2e-16 88.2 87 57.5
DCAR_019936 Daucus carota HOM05D004098 ORTHO05D005215 1.4e-15 87.0 59 74.6
BraA03t10663Z Brassica rapa HOM05D004098 ORTHO05D005215 2.2e-13 79.7 60 66.7
C02p15370 Brassica napus HOM05D004098 ORTHO05D005215 1.9e-12 76.6 59 64.4
BolC2t07653H Brassica oleracea HOM05D004098 ORTHO05D005215 1.9e-12 76.6 59 64.4
Gohir.A11G000150 Gossypium hirsutum HOM05D005360 ORTHO05D026494 1.9e-12 76.6 59 69.5
BcaC04g20111 Brassica carinata HOM05D004098 ORTHO05D005215 1.2e-11 73.9 57 64.9
Ah.01g024180 Amaranthus hybridus HOM05D000336 ORTHO05D000593 5.6e-09 65.1 36 86.1
Ah.01g007250 Amaranthus hybridus HOM05D000336 ORTHO05D000593 4.0e-07 58.9 39 69.2
EL10Ac9g22128 Beta vulgaris HOM05D000336 ORTHO05D000593 4.5e-06 55.5 38 76.3


User provided reference genes

Program Settings