Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g099720 Amaranthus hybridus HOM05D000030 ORTHO05D031031 1.4e-80 302.8 142 100.0
Ah.10g027040 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.3e-75 284.3 142 93.7
Ah.12g060160 Amaranthus hybridus HOM05D000030 ORTHO05D000009 4.5e-74 281.2 142 93.0
Ah.06g182990 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.2e-72 275.0 143 90.9
Ah.02g113190 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.8e-70 269.2 143 89.5
Ah.03g146360 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.0e-70 268.5 142 90.8
Ah.13g068380 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.7e-70 267.3 142 89.4
Ah.13g065590 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.9e-33 145.6 130 56.2
Ah.02g114490 Amaranthus hybridus HOM05D000030 ORTHO05D000009 8.5e-33 144.1 130 55.4
Ah.02g123320 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.1e-32 143.7 136 53.7
Ah.13g065680 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.9e-32 142.9 130 55.4
Ah.07g199250 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.4e-30 136.7 130 53.1
Hund07745 Selenicereus undatus HOM05D044844 ORTHO05D031031 2.0e-26 122.9 135 46.7
Ah.07g202440 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.2e-25 119.4 130 48.5
AUR62006169 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.2e-25 119.4 128 48.4
AUR62043822 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.5e-24 114.8 129 46.5
AUR62038393 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.0e-23 110.9 116 50.0
AUR62041921 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.0e-23 110.9 116 50.0
Ah.11g041580 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.3e-20 101.3 127 43.3
Hund15171 Selenicereus undatus HOM05D000030 ORTHO05D013719 1.5e-16 90.1 138 38.4
AUR62039443 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-16 87.8 83 49.4
AUR62023878 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-16 87.4 78 52.6
AUR62026477 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.5e-16 87.4 77 53.2
AUR62008621 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-15 87.0 78 52.6
Hund23655 Selenicereus undatus HOM05D000030 ORTHO05D013719 2.3e-14 82.8 131 35.1
AUR62033647 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.6e-13 79.3 110 42.7
AUR62004119 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.7e-12 76.6 72 50.0
AUR62010237 Chenopodium quinoa HOM05D000030 ORTHO05D000031 1.7e-12 76.6 72 50.0
AUR62016716 Chenopodium quinoa HOM05D000030 ORTHO05D000031 4.9e-12 75.1 114 40.4
Gohir.D04G163966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.3e-12 74.3 143 32.2
Gohir.D07G152450 Gossypium hirsutum HOM05D000030 ORTHO05D000009 8.3e-12 74.3 129 34.1
Nn4g24733 Nelumbo nucifera HOM05D000030 ORTHO05D000009 8.3e-12 74.3 142 33.1
Gohir.D01G209133 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.1e-11 73.9 129 34.1
AUR62008722 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.4e-11 73.6 72 48.6
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.4e-11 73.6 139 31.7
Gohir.D07G212166 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.4e-11 73.6 135 32.6
Gorai.006G000800 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.8e-11 73.2 129 32.6
AUR62008476 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.4e-11 72.8 168 31.5
Gohir.A03G053250 Gossypium hirsutum HOM05D000030 ORTHO05D000009 2.4e-11 72.8 136 32.4
Gohir.D07G237933 Gossypium hirsutum HOM05D000030 ORTHO05D000009 3.1e-11 72.4 136 31.6
Gohir.A13G160950 Gossypium hirsutum HOM05D000030 ORTHO05D000009 4.1e-11 72.0 136 32.4
Gohir.D11G229240 Gossypium hirsutum HOM05D000030 ORTHO05D000009 9.2e-11 70.9 143 31.5
AUR62021614 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-10 70.5 168 29.8
Hund12127 Selenicereus undatus HOM05D014957 ORTHO05D013719 1.6e-10 70.1 71 49.3
Gohir.D06G176324 Gossypium hirsutum HOM05D000030 ORTHO05D000009 2.7e-10 69.3 143 30.8
Nn5g27667 Nelumbo nucifera HOM05D000030 ORTHO05D000009 3.5e-10 68.9 138 29.0
Gohir.D09G092450 Gossypium hirsutum HOM05D000030 ORTHO05D000009 4.5e-10 68.6 143 30.1
Gohir.D01G118050 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.8e-10 67.8 128 31.2
Gohir.D09G043232 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.8e-10 67.8 136 30.9
Gohir.D12G114350 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.8e-10 67.8 143 30.1
Gorai.008G066000 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.7e-09 66.6 141 29.1
Atru.chr5.1563 Acer truncatum HOM05D000030 ORTHO05D000009 2.9e-09 65.9 120 34.2
Hma1.2p1_1093F.1_g256040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.8e-09 65.5 122 32.0
Hund09841 Selenicereus undatus HOM05D000030 ORTHO05D000009 3.8e-09 65.5 157 29.3
Peaxi162Scf00897g00411 Petunia axillaris HOM05D000030 ORTHO05D000009 8.6e-09 64.3 128 32.8
Hma1.2p1_0346F.1_g131560 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.1e-08 63.9 123 30.1
Gohir.D06G092733 Gossypium hirsutum HOM05D000030 ORTHO05D000009 1.5e-08 63.5 136 30.1
Hund12520 Selenicereus undatus HOM05D000030 ORTHO05D013719 4.3e-08 62.0 71 42.3
Ah.07g197830 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.6e-08 61.6 71 45.1
Gohir.A03G062801 Gossypium hirsutum HOM05D000030 ORTHO05D000009 7.3e-08 61.2 128 30.5
Ah.08g218550 Amaranthus hybridus HOM05D000030 ORTHO05D000009 9.5e-08 60.8 134 32.1
Aqoxy1G01896 Aquilegia oxysepala HOM05D000030 ORTHO05D000009 9.5e-08 60.8 141 32.6
A07p36400 Brassica napus HOM05D000030 ORTHO05D000009 1.6e-07 60.1 137 30.7
BraA07t31212Z Brassica rapa HOM05D000030 ORTHO05D000009 1.6e-07 60.1 137 30.7
Hund15869 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-07 59.7 119 33.6
AUR62034945 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-07 58.9 124 29.0
Gohir.A02G010901 Gossypium hirsutum HOM05D000030 ORTHO05D010590 3.6e-07 58.9 124 30.6
Gorai.005G014600 Gossypium raimondii HOM05D000030 ORTHO05D010590 4.7e-07 58.5 142 28.9
Ah.11g040900 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.1e-07 58.2 122 32.0
Os01g0698300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 6.1e-07 58.2 139 28.1
Thecc.04G172000 Theobroma cacao HOM05D000030 ORTHO05D010590 6.1e-07 58.2 126 27.0
PSO541G2409 Papaver somniferum HOM05D000030 ORTHO05D000009 8.0e-07 57.8 135 28.1
Ah.15g100040 Amaranthus hybridus HOM05D000030 ORTHO05D000009 1.0e-06 57.4 120 30.0
COL.COLO4_16743 Corchorus olitorius HOM05D000030 ORTHO05D034864 1.0e-06 57.4 68 42.6
Nn1g02346 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.4e-06 57.0 140 27.1
PSO675G2696 Papaver somniferum HOM05D000030 ORTHO05D000009 1.4e-06 57.0 135 28.1
AUR62020746 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.8e-06 56.6 143 27.3
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.3e-06 56.2 121 30.6
AUR62007833 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.3e-06 56.2 108 29.6
AUR62022422 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.3e-06 56.2 103 35.9
AUR62042158 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.3e-06 56.2 126 29.4
Gohir.D07G129132 Gossypium hirsutum HOM05D000030 ORTHO05D000009 2.3e-06 56.2 94 36.2
Ah.11g042960 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.0e-06 55.8 101 33.7
AUR62012913 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.0e-06 55.8 108 29.6
Gohir.D09G000750 Gossypium hirsutum HOM05D000030 ORTHO05D000009 3.0e-06 55.8 123 29.3
C06p43820 Brassica napus HOM05D000030 ORTHO05D000009 4.0e-06 55.5 139 28.8
BolC6t39454H Brassica oleracea HOM05D000030 ORTHO05D000009 4.0e-06 55.5 139 28.8
AUR62033685 Chenopodium quinoa HOM05D000030 ORTHO05D000009 4.0e-06 55.5 126 29.4
Ah.07g196470 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.2e-06 55.1 131 31.3
Ciclev10024286m.g Citrus clementina HOM05D000030 ORTHO05D000009 6.8e-06 54.7 155 25.8
Gohir.D01G092050 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.8e-06 54.7 128 26.6
AUR62036586 Chenopodium quinoa HOM05D000030 ORTHO05D000009 8.9e-06 54.3 126 29.4


User provided reference genes

Program Settings