Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 4.3e-153 544.7 281 100.0
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 9.4e-100 367.5 282 69.9
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 4.4e-97 358.6 282 69.5
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 3.2e-92 342.4 311 64.3
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.0e-86 323.2 288 61.8
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 4.7e-67 258.8 276 53.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.7e-61 240.4 279 52.3
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 8.6e-61 238.0 280 50.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.6e-61 238.0 274 52.9
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.1e-60 237.7 274 52.9
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.8e-58 230.3 279 50.2
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.8e-58 230.3 275 49.5
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 2.0e-57 226.9 277 50.2
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 2.6e-57 226.5 286 49.7
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.6e-57 226.5 277 52.0
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 7.0e-55 218.4 278 48.6
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.2e-54 217.6 276 49.3
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.2e-54 217.6 273 48.7
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 4.6e-54 215.7 277 49.8
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 6.0e-54 215.3 273 49.1
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 1.0e-53 214.5 282 49.3
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 3.0e-53 213.0 278 49.3
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 5.0e-53 212.2 283 47.0
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 6.6e-53 211.8 273 51.3
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 8.6e-53 211.5 277 47.7
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 7.3e-52 208.4 275 49.5
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 3.6e-51 206.1 286 48.3
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 4.7e-51 205.7 293 46.1
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 4.7e-51 205.7 287 46.0
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 8.0e-51 204.9 275 46.2
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.8e-50 203.8 274 46.7
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.8e-50 203.8 281 47.3
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 3.1e-50 203.0 276 47.5
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 4.0e-50 202.6 280 46.4
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 5.2e-50 202.2 281 45.9
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 6.8e-50 201.8 279 46.2
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 8.9e-50 201.4 290 44.8
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 8.9e-50 201.4 272 47.4
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 1.2e-49 201.1 286 47.9
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 1.2e-49 201.1 271 46.1
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 2.6e-49 199.9 284 46.1
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 4.4e-49 199.1 278 46.4
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 4.4e-49 199.1 284 44.4
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 7.5e-49 198.4 287 45.6
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 7.5e-49 198.4 283 47.0
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 7.5e-49 198.4 279 45.5
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.7e-48 197.2 301 44.9
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.7e-48 197.2 282 45.7
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.2e-48 196.8 282 45.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 4.9e-48 195.7 288 45.1
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 6.4e-48 195.3 294 45.6
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.1e-47 194.5 277 46.6
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 4.1e-47 192.6 285 44.6
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 5.4e-47 192.2 318 42.5
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 5.4e-47 192.2 278 43.9
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.2e-46 191.0 276 46.4
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 1.2e-46 191.0 269 46.5
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.6e-46 190.7 303 44.6
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 2.7e-46 189.9 286 44.4
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 4.6e-46 189.1 281 43.8
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 7.8e-46 188.3 306 39.9
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.3e-45 187.6 275 46.2
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.7e-45 187.2 284 43.7
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 6.6e-45 185.3 285 44.9
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 6.6e-45 185.3 285 45.3
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.9e-44 183.7 285 43.9
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 2.5e-44 183.3 285 44.9
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 1.2e-43 181.0 281 43.8
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 3.6e-43 179.5 314 41.7
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.4e-42 177.6 287 42.5
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 5.2e-42 175.6 283 43.8
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 4.4e-41 172.6 373 36.5
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 5.8e-41 172.2 275 44.0
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 4.9e-40 169.1 219 49.8
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 8.6e-37 158.3 336 36.0
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 7.3e-36 155.2 230 43.9
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 9.5e-36 154.8 220 46.8
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 2.8e-35 153.3 186 48.9
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 4.7e-35 152.5 288 38.5
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 6.2e-35 152.1 281 39.9
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 6.2e-35 152.1 173 49.7
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 3.1e-34 149.8 290 41.4
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.6e-33 146.7 166 50.0
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 8.4e-32 141.7 149 56.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.9e-31 140.6 148 53.4
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 5.4e-31 139.0 140 55.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 2.7e-30 136.7 180 47.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 3.5e-30 136.3 278 36.3
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 1.0e-29 134.8 151 49.0
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.7e-29 134.0 177 44.6
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 9.6e-28 128.3 172 45.3
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 8.1e-27 125.2 141 50.4
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.8e-26 124.0 285 38.2
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.4e-26 123.6 280 31.8
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 4.0e-26 122.9 287 33.1
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.5e-25 120.9 224 39.7
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 9.9e-25 118.2 322 30.1
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 3.8e-24 116.3 157 45.9
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 4.6e-22 109.4 141 46.8
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 6.0e-22 109.0 293 32.1
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 1.0e-21 108.2 277 30.7
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 1.3e-21 107.8 145 44.8
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.7e-21 107.5 150 43.3
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 5.1e-21 105.9 227 36.6
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 5.6e-20 102.4 147 44.2
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 1.5e-17 94.4 137 45.3
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 9.3e-15 85.1 54 74.1
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 2.3e-13 80.5 134 35.8
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 8.7e-13 78.6 83 54.2
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.2e-09 68.2 180 26.7
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.8e-08 63.2 108 40.7
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 1.4e-07 61.2 121 38.8
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 1.4e-07 61.2 121 38.8
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 2.7e-06 57.0 103 35.9


User provided reference genes

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