Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 5.7e-85 317.8 189 100.0
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 4.9e-36 155.2 191 55.0
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 8.4e-28 127.9 189 56.6
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 2.4e-22 109.8 111 59.5
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 4.5e-21 105.5 194 45.9
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 4.9e-20 102.1 167 50.9
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 6.4e-20 101.7 124 54.0
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.4e-19 100.5 165 47.9
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.6e-18 97.1 156 52.6
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.7e-18 96.3 175 45.7
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.7e-18 96.3 175 45.7
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.7e-18 96.3 175 45.7
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 4.6e-18 95.5 114 54.4
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 7.9e-18 94.7 144 44.4
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.0e-17 94.4 134 47.8
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.8e-17 93.6 151 46.4
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 5.1e-17 92.0 126 50.8
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 5.1e-17 92.0 150 44.0
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 5.1e-17 92.0 178 41.6
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 6.7e-17 91.7 141 48.2
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 8.7e-17 91.3 103 59.2
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 1.1e-16 90.9 121 47.1
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 1.9e-16 90.1 125 45.6
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.9e-16 90.1 148 43.9
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.9e-16 90.1 148 43.9
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 2.5e-16 89.7 168 45.2
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 2.5e-16 89.7 140 47.1
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 3.3e-16 89.4 137 47.4
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 4.3e-16 89.0 155 43.9
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 7.4e-16 88.2 144 43.8
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 9.6e-16 87.8 104 58.7
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 9.6e-16 87.8 110 51.8
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 9.6e-16 87.8 109 50.5
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.3e-15 87.4 174 39.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.3e-15 87.4 174 39.7
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.6e-15 87.0 174 44.8
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 2.1e-15 86.7 193 38.3
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 2.8e-15 86.3 155 48.4
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.8e-15 86.3 96 61.5
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 2.8e-15 86.3 168 42.3
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 3.7e-15 85.9 160 40.0
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.7e-15 85.9 171 40.9
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.7e-15 85.9 172 41.3
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.7e-15 85.9 92 56.5
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 4.8e-15 85.5 182 44.5
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 4.8e-15 85.5 168 39.3
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 6.2e-15 85.1 160 40.0
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 6.2e-15 85.1 149 43.6
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 8.2e-15 84.7 138 53.6
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.1e-14 84.3 152 44.7
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.8e-14 83.6 156 51.3
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.8e-14 83.6 183 38.3
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 3.1e-14 82.8 136 47.1
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 3.1e-14 82.8 103 54.4
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 4.0e-14 82.4 94 63.8
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 4.0e-14 82.4 141 45.4
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 9.0e-14 81.3 151 42.4
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-13 80.9 182 37.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-13 80.5 153 44.4
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.5e-13 80.5 147 43.5
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 3.4e-13 79.3 159 44.0
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.4e-13 79.3 109 51.4
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 3.4e-13 79.3 168 39.3
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 7.6e-13 78.2 181 47.0
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.0e-12 77.8 185 41.1
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.3e-12 77.4 105 49.5
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 4.9e-12 75.5 110 57.3
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 6.5e-12 75.1 73 69.9
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 6.5e-12 75.1 163 36.8
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 8.4e-12 74.7 189 42.3
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.4e-11 73.9 118 41.5
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.9e-11 73.6 129 41.1
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.9e-11 73.6 115 47.8
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.5e-11 73.2 142 37.3
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.5e-11 73.2 117 40.2
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 4.2e-11 72.4 93 48.4
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 9.3e-11 71.2 81 54.3
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.2e-10 70.9 132 40.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 2.1e-10 70.1 159 36.5
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 2.7e-10 69.7 154 41.6
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.7e-10 69.7 110 53.6
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 6.1e-10 68.6 178 39.9
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 1.0e-09 67.8 143 42.7
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 1.8e-09 67.0 103 53.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 2.3e-09 66.6 145 38.6
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 5.1e-09 65.5 124 37.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 5.1e-09 65.5 124 37.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 5.1e-09 65.5 124 37.9
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 6.7e-09 65.1 79 51.9
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.1e-08 64.3 79 50.6
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 2.5e-08 63.2 112 43.8
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 2.5e-08 63.2 125 40.8
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 4.3e-08 62.4 72 55.6
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 7.4e-08 61.6 112 42.9
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 9.7e-08 61.2 69 52.2
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 1.6e-07 60.5 74 51.4
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 6.3e-07 58.5 69 47.8
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 6.3e-07 58.5 122 40.2
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 9.0e-06 54.7 144 36.8


User provided reference genes

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