Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g098240 Amaranthus hybridus HOM05D005220 ORTHO05D006082 4.0e-110 401.4 190 100.0
AUR62021593 Chenopodium quinoa HOM05D005220 ORTHO05D006082 3.7e-23 112.5 312 32.4
AUR62008499 Chenopodium quinoa HOM05D005220 ORTHO05D006082 3.6e-18 95.9 104 49.0
Hund02603 Selenicereus undatus HOM05D005220 ORTHO05D006082 9.7e-16 87.8 109 42.2
ECA246G3789 Erigeron canadensis HOM05D005220 ORTHO05D006082 1.4e-14 84.0 102 45.1
DCAR_011050 Daucus carota HOM05D005220 ORTHO05D006082 3.1e-14 82.8 176 31.8
Ah.11g047990 Amaranthus hybridus HOM05D005220 ORTHO05D006082 2.2e-12 76.6 104 44.2
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.5e-12 75.1 87 54.0
Cpa.g.sc94.10 Carica papaya HOM05D005220 ORTHO05D006082 1.1e-11 74.3 135 37.0
Ca_13809_v3 Cicer arietinum L. HOM05D005220 ORTHO05D006082 5.5e-11 72.0 119 36.1
Ciclev10020317m.g Citrus clementina HOM05D005220 ORTHO05D006082 7.2e-11 71.6 131 35.9
ECA232G0957 Erigeron canadensis HOM05D005220 ORTHO05D006082 7.2e-11 71.6 116 35.3
TPR.G12226 Trifolium pratense HOM05D005220 ORTHO05D006082 3.6e-10 69.3 153 34.6
CiPaw.11G050100 Carya illinoinensis HOM05D005220 ORTHO05D006082 6.1e-10 68.6 98 36.7
Dinv34960 Davidia involucrata HOM05D005220 ORTHO05D006082 6.1e-10 68.6 170 30.6
Hund02604 Selenicereus undatus HOM05D005220 ORTHO05D006082 6.1e-10 68.6 145 31.0
Sc04g0003090 Simmondsia chinensis HOM05D005220 ORTHO05D006082 3.9e-09 65.9 125 32.8
Lj1g0005307 Lotus japonicus HOM05D005220 ORTHO05D006082 6.7e-09 65.1 117 35.0
Medtr3g023750 Medicago truncatula HOM05D005220 ORTHO05D006082 6.7e-09 65.1 126 33.3
Actinidia01983 Actinidia chinensis HOM05D005220 ORTHO05D006082 8.8e-09 64.7 134 32.8
Sed0003803 Sechium edule HOM05D005220 ORTHO05D006082 8.8e-09 64.7 99 34.3
COL.COLO4_22223 Corchorus olitorius HOM05D005220 ORTHO05D006082 1.1e-08 64.3 133 34.6
EL10Ac5g11101 Beta vulgaris HOM05D005220 ORTHO05D006082 1.5e-08 63.9 136 30.9
CsaV3_1G002740 Cucumis sativus L. HOM05D005220 ORTHO05D006082 1.5e-08 63.9 140 29.3
SGA_v2.0_scaffold11G05525 Striga asiatica HOM05D006954 ORTHO05D008729 1.5e-08 63.9 122 30.3
GSVIVG01007924001 Vitis vinifera HOM05D005220 ORTHO05D006082 1.5e-08 63.9 104 37.5
CAN.G979.12 Capsicum annuum HOM05D005220 ORTHO05D006082 2.0e-08 63.5 158 32.9
HanXRQChr05g0157201 Helianthus annuus HOM05D005220 ORTHO05D006082 2.0e-08 63.5 97 37.1
Lsat_1_v5_gn_7_8881 Lactuca sativa HOM05D006954 ORTHO05D008729 2.6e-08 63.2 115 27.8
QL10p018718 Quercus lobata HOM05D005220 ORTHO05D006082 2.6e-08 63.2 171 26.9
MELO3C017209.2 Cucumis melo HOM05D005220 ORTHO05D006082 3.3e-08 62.8 140 26.4
Cfa019301 Carpinus fangiana HOM05D005220 ORTHO05D006082 4.4e-08 62.4 128 32.0
Lsat_1_v5_gn_5_21940 Lactuca sativa HOM05D005220 ORTHO05D006082 4.4e-08 62.4 99 34.3
Lalb_Chr23g0273001 Lupinus albus HOM05D005220 ORTHO05D006082 4.4e-08 62.4 177 31.6
Prupe.5G201200 Prunus persica HOM05D005220 ORTHO05D006082 5.7e-08 62.0 98 33.7
PGSC0003DMG400025138 Solanum tuberosum HOM05D005220 ORTHO05D006082 5.7e-08 62.0 131 33.6
Dinv33817 Davidia involucrata HOM05D005220 ORTHO05D006082 9.7e-08 61.2 137 31.4
ECA232G4448 Erigeron canadensis HOM05D005220 ORTHO05D006082 9.7e-08 61.2 98 34.7
Glyma.08G242800 Glycine max HOM05D005220 ORTHO05D006082 9.7e-08 61.2 183 26.8
TAR374G0076 Trochodendron aralioides HOM05D005220 ORTHO05D006082 9.7e-08 61.2 164 26.2
vmacro18154 Vaccinium macrocarpon HOM05D005220 ORTHO05D006082 9.7e-08 61.2 128 28.9
ClCG06G015820 Citrullus lanatus HOM05D005220 ORTHO05D006082 1.3e-07 60.8 130 32.3
Gohir.D07G074000 Gossypium hirsutum HOM05D005220 ORTHO05D006082 1.3e-07 60.8 142 28.9
Gorai.001G078200 Gossypium raimondii HOM05D005220 ORTHO05D006082 1.3e-07 60.8 142 28.9
Sabra17G0080700 Salix brachista HOM05D005220 ORTHO05D006082 1.3e-07 60.8 127 29.1
Thecc.03G097300 Theobroma cacao HOM05D005220 ORTHO05D006082 1.3e-07 60.8 132 31.1
Duzib205G0201 Durio zibethinus HOM05D005220 ORTHO05D006082 2.2e-07 60.1 143 30.8
TAR636G1204 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.2e-07 60.1 130 31.5
CAN.G979.11 Capsicum annuum HOM05D005220 ORTHO05D006082 2.8e-07 59.7 134 32.1
Haze_07684 Corylus avellana HOM05D005220 ORTHO05D006082 2.8e-07 59.7 128 30.5
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla HOM05D005220 ORTHO05D006082 2.8e-07 59.7 125 31.2
TAR629G0541 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.8e-07 59.7 133 27.1
FAN08G2293 Fragaria x ananassa HOM05D005220 ORTHO05D006082 3.7e-07 59.3 102 29.4
Gohir.D12G183566 Gossypium hirsutum HOM05D005220 ORTHO05D006082 3.7e-07 59.3 145 29.0
MD14G1208900 Malus domestica HOM05D005220 ORTHO05D006082 3.7e-07 59.3 125 32.0
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 4.8e-07 58.9 111 29.7
Gorai.008G196900 Gossypium raimondii HOM05D005220 ORTHO05D006082 4.8e-07 58.9 145 29.0
Sed0005854 Sechium edule HOM05D005220 ORTHO05D006082 4.8e-07 58.9 137 31.4
ECA233G0962 Erigeron canadensis HOM05D006954 ORTHO05D008729 6.3e-07 58.5 172 24.4
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 6.3e-07 58.5 99 31.3
HanXRQChr06g0168891 Helianthus annuus HOM05D006954 ORTHO05D008729 6.3e-07 58.5 120 25.8
HanXRQChr06g0169051 Helianthus annuus HOM05D006954 ORTHO05D008729 6.3e-07 58.5 120 25.8
AUR62043100 Chenopodium quinoa HOM05D005220 ORTHO05D006082 8.2e-07 58.2 87 46.0
Lsat_1_v5_gn_2_87740 Lactuca sativa HOM05D005220 ORTHO05D006082 1.1e-06 57.8 125 28.8
Oeu010241.1 Olea europaea HOM05D005220 ORTHO05D006082 1.1e-06 57.8 124 29.0
SEGI_37162 Sequoiadendron giganteum HOM05D015783 ORTHO05D021004 1.1e-06 57.8 123 29.3
VMungo1383G2795 Vigna mungo HOM05D005220 ORTHO05D006082 1.1e-06 57.8 170 26.5
CDE10G0382 Ceratophyllum demersum HOM05D005220 ORTHO05D006082 1.8e-06 57.0 141 29.1
TAR622G0939 Trochodendron aralioides HOM05D005220 ORTHO05D006082 2.4e-06 56.6 189 24.9
FvH4_5g14276 Fragaria vesca HOM05D005220 ORTHO05D006082 3.1e-06 56.2 183 24.0
RcHm_v2.0_Chr7g0182621 Rosa chinensis HOM05D005220 ORTHO05D006082 3.1e-06 56.2 98 29.6
MBI16_g09907_MAGBIO Magnolia biondii HOM05D005220 ORTHO05D006082 7.0e-06 55.1 128 27.3
Oeu062150.1 Olea europaea HOM05D005220 ORTHO05D006082 7.0e-06 55.1 129 27.9
ATR0681G067 Amborella trichopoda HOM05D005220 ORTHO05D006082 9.1e-06 54.7 204 26.5


User provided reference genes

Program Settings