Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g097860 Amaranthus hybridus HOM05D012832 ORTHO05D019522 0.0e+00 1591.6 827 100.0
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 0.0e+00 1177.2 619 97.7
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 0.0e+00 1119.0 619 94.2
AUR62006473 Chenopodium quinoa HOM05D012832 ORTHO05D019522 1.5e-121 441.4 645 42.6
AUR62043811 Chenopodium quinoa HOM05D012832 ORTHO05D019522 1.2e-65 255.8 613 33.0
AUR62044041 Chenopodium quinoa HOM05D012832 ORTHO05D019522 6.2e-59 233.4 613 32.0
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.7e-53 213.4 126 88.1
Ah.07g198610 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.9e-34 150.2 126 57.1
Ah.01g012990 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.3e-28 131.3 124 50.8
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.3e-28 131.3 127 49.6
Ah.04g156790 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.7e-27 129.0 70 75.7
AUR62033910 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.6e-22 111.3 71 64.8
AUR62006479 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.0e-21 109.8 87 54.0
AUR62016413 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.4e-21 109.4 89 55.1
AUR62044430 Chenopodium quinoa HOM05D002361 ORTHO05D000002 2.3e-21 108.6 71 64.8
AUR62042688 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.9e-21 107.8 71 64.8
AUR62003126 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.7e-21 107.1 94 55.3
AUR62029366 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.7e-21 107.1 127 44.9
AUR62041613 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.7e-21 107.1 94 54.3
AUR62026940 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.8e-21 106.7 71 62.0
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.0e-20 105.5 138 42.0
Ah.12g064200 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.3e-20 104.8 105 49.5
AUR62022484 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.3e-20 104.8 123 42.3
AUR62031087 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.4e-20 104.4 127 42.5
AUR62037042 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.7e-20 104.0 94 52.1
AUR62033568 Chenopodium quinoa HOM05D000004 ORTHO05D000002 7.4e-20 103.6 127 38.6
AUR62007189 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-19 102.8 138 41.3
Ah.14g081330 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.3e-19 100.5 127 38.6
AUR62013530 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.3e-19 100.5 78 55.1
AUR62026331 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.1e-18 99.8 138 42.8
AUR62007521 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.4e-18 99.4 82 54.9
AUR62024222 Chenopodium quinoa HOM05D000004 ORTHO05D017249 1.4e-18 99.4 85 51.8
AUR62029367 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.4e-18 99.4 127 43.3
AUR62037448 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.1e-18 97.8 84 53.6
AUR62030093 Chenopodium quinoa HOM05D000349 ORTHO05D000002 5.3e-18 97.4 71 59.2
Ah.04g157740 Amaranthus hybridus HOM05D000004 ORTHO05D000002 4.5e-17 94.4 94 45.7
Thecc.07G157300 Theobroma cacao HOM05D011123 ORTHO05D013313 1.3e-16 92.8 343 27.4
Ah.16g105440 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.2e-16 92.0 74 50.0
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.0e-16 90.9 77 48.1
Ah.01g010230 Amaranthus hybridus HOM05D000004 ORTHO05D017249 6.5e-16 90.5 73 49.3
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.5e-16 90.1 132 31.8
Ah.16g109500 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.2e-15 88.2 74 50.0
AUR62003850 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.2e-14 86.3 130 37.7
Ah.03g143850 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.6e-14 84.7 65 52.3
AUR62041159 Chenopodium quinoa HOM05D012832 ORTHO05D017249 1.8e-13 82.4 65 63.1
Ah.01g008560 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.1e-12 79.7 62 54.8
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-12 79.7 68 42.6
AUR62042370 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.6e-12 78.6 52 63.5
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 7.4e-12 77.0 68 41.2
CAN.G1646.4 Capsicum annuum HOM05D018515 ORTHO05D002107 9.7e-12 76.6 68 45.6
Ah.12g061050 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.7e-11 75.9 126 45.2
PSO017G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 75.9 78 43.6
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 75.9 66 42.4
AUR62041254 Chenopodium quinoa HOM05D012832 ORTHO05D017249 2.2e-11 75.5 62 54.8
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-11 75.5 78 42.3
PSO339G0831 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-11 75.5 65 47.7
Sopen05g018990 Solanum pennellii HOM05D000002 ORTHO05D000002 3.7e-11 74.7 82 40.2
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 4.8e-11 74.3 65 46.2
Ah.07g199500 Amaranthus hybridus HOM05D012832 ORTHO05D019522 6.3e-11 73.9 83 42.2
Sopen01g013800 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-11 73.9 82 43.9
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 8.2e-11 73.6 66 43.9
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 8.2e-11 73.6 72 44.4
PSO210G0982 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-10 72.4 66 39.4
PSO017G3809 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-10 72.0 81 39.5
PSO675G3155 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-10 72.0 81 39.5
PSO170G5728 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-10 71.6 65 40.0
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-10 71.2 80 38.8
PSO384G3277 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-10 71.2 92 37.0
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-10 71.2 89 36.0
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-10 70.9 65 40.0
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-10 70.9 87 34.5
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.0e-10 70.5 64 45.3
PSO063G0124 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-10 70.5 62 43.5
PSO478G3301 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-10 70.5 68 41.2
CAN.G1012.10 Capsicum annuum HOM05D000004 ORTHO05D002107 9.1e-10 70.1 68 39.7
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 70.1 64 42.2
PSO063G2903 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 70.1 71 40.8
PSO210G0641 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 70.1 90 35.6
PSO541G1232 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 70.1 109 36.7
PSO675G5993 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-10 70.1 65 36.9
Ah.04g156070 Amaranthus hybridus HOM05D000004 ORTHO05D017249 1.2e-09 69.7 63 47.6
PSO111G0026 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 69.7 68 44.1
PSO675G9263 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 69.7 64 39.1
Sopen06g014540 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-09 69.7 69 39.1
Nitab4.5_0004579g0050 Nicotiana tabacum HOM05D000004 ORTHO05D000002 1.6e-09 69.3 84 39.3
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 69.3 65 44.6
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-09 69.3 80 40.0
PSO063G3877 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 68.9 88 31.8
PSO455G0227 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 68.9 68 42.6
PSO782G2672 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 68.9 65 43.1
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-09 68.9 87 33.3
PSO063G3882 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-09 68.6 75 38.7
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-09 68.2 83 36.1
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 67.4 97 32.0
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 67.4 86 39.5
PSO541G4684 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 67.4 63 44.4
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 67.4 86 39.5
PSO478G1420 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-09 67.0 65 36.9
Ah.05g171460 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.0e-08 66.6 96 38.5
PSO782G2503 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-08 66.6 66 39.4
PSO782G4522 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-08 66.6 65 38.5
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-08 66.6 81 33.3
PSO339G1607 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 65.9 65 35.4
PSO478G3389 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 65.9 77 36.4
PSO675G5638 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 65.9 66 37.9
PSO675G6766 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-08 65.1 79 31.6
Manes.05G186755 Manihot esculenta HOM05D000004 ORTHO05D000002 3.8e-08 64.7 67 37.3
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 64.7 101 36.6
PSO210G1314 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 64.7 65 40.0
PSO675G3806 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 64.7 65 35.4
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-08 64.7 90 32.2
Ah.12g059130 Amaranthus hybridus HOM05D000004 ORTHO05D017249 5.0e-08 64.3 53 50.9
Ah.12g059140 Amaranthus hybridus HOM05D000004 ORTHO05D017249 5.0e-08 64.3 53 50.9
Ah.12g059150 Amaranthus hybridus HOM05D000004 ORTHO05D017249 5.0e-08 64.3 53 50.9
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 5.0e-08 64.3 81 37.0
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 5.0e-08 64.3 81 37.0
PSO170G6288 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 64.3 64 42.2
PSO384G1135 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 64.3 79 35.4
Manes.16G043152 Manihot esculenta HOM05D016502 ORTHO05D019286 6.5e-08 63.9 70 32.9
Ah.12g065500 Amaranthus hybridus HOM05D012832 ORTHO05D060814 8.5e-08 63.5 64 45.3
PSO063G2309 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 63.2 65 32.3
PSO170G3746 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 63.2 83 32.5
PSO339G1576 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 63.2 65 36.9
PSO461G0041 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 63.2 66 37.9
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 62.8 66 36.4
PSO675G9204 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 62.8 95 29.5
PSO724G0511 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 62.8 76 34.2
Manes.14G155101 Manihot esculenta HOM05D016502 ORTHO05D019286 1.9e-07 62.4 92 34.8
PSO210G7018 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 62.4 92 30.4
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 62.4 66 36.4
PSO675G6875 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 62.4 66 36.4
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 62.4 75 36.0
Sabra16G0137300 Salix brachista HOM05D000004 ORTHO05D000002 1.9e-07 62.4 96 32.3
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-07 62.0 81 35.8
Os03g0300700 Oryza sativa ssp. japonica HOM05D000004 ORTHO05D000002 3.2e-07 61.6 66 42.4
PSO782G3890 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-07 61.6 76 39.5
PSO801G0540 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-07 61.6 65 38.5
PGSC0003DMG400036820 Solanum tuberosum HOM05D018515 ORTHO05D002107 4.2e-07 61.2 60 41.7
PSO063G4254 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-07 60.8 89 31.5
PSO832G2519 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-07 60.8 53 45.3
PSO210G6199 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 60.5 85 32.9
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 60.5 64 34.4
PSO832G1141 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-07 60.5 53 41.5
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 7.2e-07 60.5 83 32.5
BcaB05g22502 Brassica carinata HOM05D011596 ORTHO05D000002 9.4e-07 60.1 58 44.8
Hma1.2p1_0849F.1_g227950 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-07 60.1 68 44.1
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 9.4e-07 60.1 57 36.8
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.2e-06 59.7 64 35.9
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 59.3 86 33.7
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 59.3 86 33.7
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.6e-06 59.3 65 35.4
Manes.13G104850 Manihot esculenta HOM05D016502 ORTHO05D019286 1.6e-06 59.3 67 31.3
Ah.11g041260 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.1e-06 58.9 93 39.8
Manes.16G136150 Manihot esculenta HOM05D016502 ORTHO05D002107 2.1e-06 58.9 71 29.6
PSO478G0477 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 58.9 92 29.3
PSO063G1275 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 58.5 60 38.3
PSO063G3333 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 58.5 88 30.7
PSO782G4277 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-06 58.5 49 42.9
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 58.2 81 32.1
PSO541G0705 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-06 57.4 73 42.5
PSO541G3617 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-06 57.4 53 39.6
ECA234G2434 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 57.0 92 31.5
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 8.0e-06 57.0 88 29.5


User provided reference genes

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