Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-180 636.0 313 100.0
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.5e-137 491.5 265 88.3
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-136 489.2 257 90.7
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.3e-132 474.9 254 91.3
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.0e-87 325.9 245 62.0
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-65 253.8 234 53.0
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.5e-65 253.4 234 52.1
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 6.4e-61 238.8 239 50.6
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-59 234.6 235 48.9
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.1e-59 233.8 235 49.4
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.5e-59 233.0 228 50.0
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.3e-58 231.1 240 46.7
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-58 230.3 235 50.2
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 3.0e-58 229.9 235 48.9
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.0e-58 229.9 237 48.9
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 6.6e-58 228.8 224 48.7
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-57 228.0 240 46.2
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-57 228.0 240 46.2
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 1.5e-57 227.6 237 47.3
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-57 227.3 240 46.2
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-57 226.9 221 47.5
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-57 226.5 221 47.1
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-57 226.1 235 48.9
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-57 225.7 224 48.2
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-57 225.7 226 49.1
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.6e-57 225.7 251 46.6
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 7.3e-57 225.3 224 48.7
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.5e-57 224.9 225 46.2
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 9.5e-57 224.9 234 45.7
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-56 224.6 224 47.8
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-56 224.2 226 48.7
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-56 224.2 225 45.8
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.8e-56 223.4 226 48.2
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.6e-56 223.0 207 53.1
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 3.6e-56 223.0 237 46.8
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 3.6e-56 223.0 236 47.0
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.7e-56 222.6 225 45.8
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 4.7e-56 222.6 224 48.2
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.2e-56 222.2 224 46.0
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 6.2e-56 222.2 220 48.2
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.1e-56 221.9 226 47.3
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 8.1e-56 221.9 224 48.2
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-55 221.1 224 46.0
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-55 221.1 225 45.3
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-55 221.1 224 45.5
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-55 220.7 225 45.8
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-55 220.3 225 45.3
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-55 220.3 219 48.4
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-55 219.5 220 46.4
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.8e-55 218.8 217 48.8
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.9e-55 218.4 225 44.4
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-54 218.0 226 46.5
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.5e-54 217.6 226 46.9
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-54 217.6 234 46.2
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.4e-54 216.1 224 45.5
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 4.4e-54 216.1 224 48.2
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.8e-54 215.7 226 44.7
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.8e-54 215.7 226 45.6
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.8e-54 215.7 224 44.6
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 7.6e-54 215.3 206 49.5
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.9e-54 214.9 226 44.2
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-53 214.5 226 44.2
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-53 214.5 226 44.2
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.3e-53 214.5 234 47.9
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-53 214.2 224 46.4
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-53 214.2 207 49.3
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-53 213.8 226 44.2
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 2.2e-53 213.8 230 45.7
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-53 213.4 219 44.7
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-53 213.4 226 43.8
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-53 213.4 224 46.4
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-53 213.4 224 46.0
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.9e-53 213.4 210 51.0
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.8e-53 213.0 221 46.6
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 3.8e-53 213.0 245 40.8
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-52 211.5 225 44.4
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.4e-52 211.1 226 43.8
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.4e-52 210.3 211 52.1
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.1e-52 208.8 226 43.4
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-51 207.2 218 46.8
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-51 206.5 202 49.0
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-50 204.9 224 46.0
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.0e-50 204.9 235 43.0
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.7e-50 204.1 209 50.2
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 2.3e-50 203.8 235 45.5
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-50 203.0 232 45.3
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.9e-50 203.0 215 49.3
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.3e-49 198.7 236 41.9
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-48 196.4 234 44.4
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 4.7e-48 196.1 212 46.7
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-47 194.9 225 42.7
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.1e-47 193.4 191 51.8
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-47 193.0 219 44.7
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 6.9e-47 192.2 223 43.9
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 9.0e-47 191.8 225 43.6
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-46 191.4 241 41.1
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 9.9e-46 188.3 225 42.7
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 9.9e-46 188.3 234 41.9
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.9e-46 188.3 187 51.3
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-45 187.2 197 46.7
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-45 186.4 218 44.5
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-44 183.7 218 43.6
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 9.3e-44 181.8 234 41.0
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 9.3e-44 181.8 234 41.0
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 1.6e-43 181.0 227 40.1
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-43 180.3 196 45.9
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 2.3e-42 177.2 225 39.1
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 3.0e-42 176.8 198 45.5
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 8.7e-42 175.3 173 50.9
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.7e-42 175.3 182 47.3
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-41 174.1 174 49.4
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-41 173.7 224 40.2
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-41 172.9 219 41.6
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-41 172.6 155 52.3
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 3.6e-40 169.9 198 44.4
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-39 168.3 178 44.9
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-38 164.9 178 43.8
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-38 164.9 172 46.5
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-37 161.4 161 47.8
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 6.4e-37 159.1 172 46.5
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 8.4e-37 158.7 167 46.7
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-36 156.0 224 37.5
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-35 154.8 164 45.1
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.6e-35 152.9 150 52.0
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-34 151.4 196 40.3
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.0e-34 150.2 221 37.6
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.5e-33 147.1 141 49.6
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.6e-33 145.2 235 35.7
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.8e-32 143.7 142 48.6
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-30 137.9 235 35.3
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 2.0e-30 137.5 130 56.2
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.7e-29 134.4 236 35.2
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 9.3e-28 128.6 197 38.1
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-27 128.3 218 34.9
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 6.0e-27 125.9 220 33.6
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 1.0e-26 125.2 225 31.1
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 1.8e-26 124.4 115 53.0
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 4.3e-25 119.8 120 48.3
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-24 118.2 136 42.6
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-23 115.2 120 47.5
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-23 114.4 105 53.3
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-23 114.0 99 54.5
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.0e-23 113.2 109 51.4
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 6.9e-23 112.5 116 48.3
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 9.0e-23 112.1 110 49.1
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 1.2e-22 111.7 133 45.9
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-22 110.5 106 52.8
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 1.3e-21 108.2 120 42.5
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 1.3e-21 108.2 120 42.5
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 2.2e-21 107.5 115 43.5
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-20 104.8 141 41.1
COL.COLO4_04492 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-20 103.6 108 45.4
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 5.5e-20 102.8 113 47.8
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-17 94.4 139 38.8
MCO17G025 Micromonas commoda HOM05D003057 ORTHO05D003904 1.9e-17 94.4 217 28.1
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 1.9e-17 94.4 105 43.8
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 6.3e-16 89.4 234 27.4
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-15 88.6 105 41.0
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 1.8e-15 87.8 114 37.7
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 6.9e-15 85.9 102 38.2
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-14 84.3 77 46.8
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-13 80.9 86 46.5
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.9e-13 80.5 73 56.2
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-13 80.5 75 52.0
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.5e-12 76.3 76 47.4
TPR.G29392 Trifolium pratense HOM05D003057 ORTHO05D003904 6.1e-11 72.8 78 43.6
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 7.9e-11 72.4 101 35.6
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.3e-09 66.6 125 34.4
ECA236G3949 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.1e-07 60.5 42 61.9
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-06 57.8 43 58.1


User provided reference genes

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