Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.9e-285 984.6 503 100.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.1e-236 823.2 503 82.1
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 2.4e-231 805.4 503 81.3
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.7e-230 800.4 503 80.3
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.1e-227 790.8 503 79.5
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.8e-203 712.2 501 72.3
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 6.4e-192 674.5 504 68.1
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.5e-185 653.3 469 68.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 2.0e-185 652.9 471 68.2
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.0e-185 652.9 473 69.3
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 2.9e-184 649.0 460 70.7
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 1.9e-183 646.4 461 69.6
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 2.1e-182 642.9 477 68.3
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 6.0e-182 641.3 473 68.5
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 6.0e-182 641.3 479 67.4
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 7.9e-182 641.0 468 69.2
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.3e-181 640.2 448 70.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 6.7e-181 637.9 476 67.0
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 9.6e-180 634.0 510 63.5
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.1e-179 632.9 469 68.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 6.2e-179 631.3 449 70.2
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.4e-178 629.4 471 66.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.9e-178 627.9 471 66.0
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.0e-178 627.5 471 66.0
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.2e-177 627.1 471 66.0
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.5e-177 625.2 467 67.5
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.8e-177 624.8 511 64.2
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 7.6e-177 624.4 469 65.9
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 1.3e-176 623.6 477 65.8
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.7e-176 623.2 467 67.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 6.4e-176 621.3 479 66.6
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 8.4e-176 620.9 478 63.8
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.4e-175 620.2 467 67.0
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 2.4e-175 619.4 468 67.5
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.2e-175 618.6 469 65.5
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.5e-175 618.2 458 66.6
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 5.5e-175 618.2 450 68.2
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 9.3e-175 617.5 451 66.3
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.2e-174 617.1 449 67.5
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 1.2e-174 617.1 472 68.0
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 2.1e-174 616.3 512 60.5
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 2.7e-174 615.9 514 62.8
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 3.5e-174 615.5 447 68.5
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 3.5e-174 615.5 477 65.8
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 4.6e-174 615.1 449 67.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 4.6e-174 615.1 472 67.4
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 7.9e-174 614.4 446 67.3
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 7.9e-174 614.4 492 65.0
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.0e-173 614.0 468 66.9
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.3e-173 613.6 476 65.1
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.3e-173 612.8 460 66.3
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.3e-173 612.8 478 65.3
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 6.7e-173 611.3 476 64.9
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 6.7e-173 611.3 506 61.5
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.1e-172 610.5 447 66.9
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 5.6e-172 608.2 489 63.8
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.6e-171 606.7 508 61.0
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 2.8e-171 605.9 506 61.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.8e-171 605.9 462 66.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 6.2e-171 604.7 471 66.2
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.1e-170 604.0 473 62.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.1e-170 602.4 477 63.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 3.1e-170 602.4 442 66.7
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 1.3e-168 597.0 474 63.5
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.8e-168 595.5 452 64.4
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 7.9e-166 587.8 463 62.9
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.0e-165 587.4 440 67.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.3e-164 582.4 461 64.6
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.3e-163 580.5 439 66.3
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.1e-162 577.4 481 61.7
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 6.9e-162 574.7 422 67.5
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 5.0e-160 568.5 438 64.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.5e-159 565.1 455 63.1
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 2.7e-158 562.8 455 62.0
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 3.6e-158 562.4 484 59.7
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.0e-157 560.8 483 59.8
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 5.1e-157 558.5 457 61.1
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.3e-156 555.8 457 61.1
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 5.7e-156 555.1 447 61.5
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 9.7e-156 554.3 455 63.7
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.3e-155 553.9 489 58.5
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.6e-155 553.5 457 60.6
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 4.8e-155 552.0 482 58.5
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 8.2e-155 551.2 408 66.2
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.8e-154 550.1 457 63.9
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.8e-154 550.1 453 61.1
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 5.3e-154 548.5 463 59.2
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.5e-153 547.0 465 58.7
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 3.4e-153 545.8 451 62.3
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.0e-152 544.3 476 57.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.1e-151 540.8 426 63.4
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.4e-151 540.4 473 58.4
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 2.5e-135 486.5 398 61.3
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 3.0e-133 479.6 428 55.4
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 5.2e-133 478.8 381 64.0
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.7e-131 473.8 457 53.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 3.1e-130 469.5 420 55.0
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 9.1e-130 468.0 354 65.0
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 4.4e-116 422.5 386 57.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 4.5e-113 412.5 287 70.7
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 7.0e-106 388.7 365 55.9
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 5.6e-103 379.0 457 43.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 8.9e-93 345.1 256 66.0
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 9.9e-84 315.1 421 41.1
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.1e-82 311.6 244 66.4
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.1e-79 301.6 423 42.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.5e-76 291.2 213 70.0
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.8e-62 243.8 434 35.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 6.2e-62 242.7 418 34.9
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 8.1e-62 242.3 151 77.5
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 3.5e-57 226.9 134 79.9
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 6.7e-40 169.5 171 50.3
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.5e-31 141.7 209 39.7
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 2.6e-31 141.0 228 37.7
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 2.2e-30 137.9 228 37.3
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.1e-29 134.0 126 55.6
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.6e-28 131.0 149 49.7
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 4.4e-23 113.6 88 58.0
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 1.7e-14 85.1 89 44.9


User provided reference genes

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