Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 3.4e-61 238.8 129 100.0
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 5.1e-49 198.4 129 86.0
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 2.6e-48 196.1 125 83.2
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 9.7e-40 167.5 118 78.0
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 6.3e-39 164.9 123 71.5
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 1.1e-38 164.1 120 75.0
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 2.4e-38 162.9 119 75.6
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 5.3e-38 161.8 119 73.1
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.3e-38 161.8 123 72.4
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 2.0e-37 159.8 121 71.9
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 2.6e-37 159.5 121 68.6
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 4.5e-37 158.7 120 76.7
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 7.7e-37 157.9 121 72.7
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 7.7e-37 157.9 117 72.6
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 1.3e-36 157.1 121 67.8
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 1.7e-36 156.8 124 67.7
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 2.9e-36 156.0 120 73.3
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 2.9e-36 156.0 118 70.3
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 3.8e-36 155.6 124 67.7
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 8.5e-36 154.5 119 72.3
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 8.5e-36 154.5 124 68.5
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 1.5e-35 153.7 117 68.4
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 1.9e-35 153.3 121 70.2
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 1.9e-35 153.3 121 70.2
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 1.9e-35 153.3 125 68.8
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 5.5e-35 151.8 119 71.4
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 5.5e-35 151.8 136 66.2
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 7.2e-35 151.4 121 71.1
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 9.4e-35 151.0 127 66.1
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 9.4e-35 151.0 126 66.7
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 1.2e-34 150.6 121 69.4
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.2e-34 150.6 118 67.8
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 1.6e-34 150.2 124 65.3
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 1.6e-34 150.2 108 74.1
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 2.1e-34 149.8 108 73.1
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 2.7e-34 149.4 114 71.9
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.6e-34 149.1 115 69.6
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 4.7e-34 148.7 111 73.0
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 6.1e-34 148.3 116 68.1
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 1.0e-33 147.5 117 65.8
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.0e-33 147.5 121 66.9
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 1.8e-33 146.7 110 70.0
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 2.3e-33 146.4 121 66.9
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 5.2e-33 145.2 121 66.9
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 5.2e-33 145.2 105 73.3
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 5.2e-33 145.2 120 68.3
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 6.7e-33 144.8 124 64.5
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 8.8e-33 144.4 110 70.0
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 1.2e-32 144.1 123 65.9
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 1.5e-32 143.7 122 66.4
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 1.5e-32 143.7 120 65.0
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.5e-32 143.7 108 70.4
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 1.5e-32 143.7 105 75.2
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 2.6e-32 142.9 107 71.0
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 3.3e-32 142.5 121 66.1
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 4.4e-32 142.1 118 64.4
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 5.7e-32 141.7 126 62.7
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 7.5e-32 141.4 135 60.0
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 9.7e-32 141.0 117 65.0
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 1.7e-31 140.2 101 72.3
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 2.2e-31 139.8 102 72.5
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 2.8e-31 139.4 139 56.8
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 3.7e-31 139.0 120 62.5
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 6.3e-31 138.3 105 69.5
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 6.3e-31 138.3 102 71.6
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 6.3e-31 138.3 120 63.3
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 8.2e-31 137.9 125 63.2
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 8.2e-31 137.9 120 67.5
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.1e-30 137.5 107 65.4
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 1.4e-30 137.1 115 65.2
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 1.8e-30 136.7 121 62.8
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 2.4e-30 136.3 125 62.4
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 2.4e-30 136.3 125 62.4
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 3.1e-30 136.0 105 67.6
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 4.1e-30 135.6 100 70.0
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 5.3e-30 135.2 97 73.2
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 5.3e-30 135.2 97 73.2
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 5.3e-30 135.2 97 73.2
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 7.0e-30 134.8 98 72.4
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 9.1e-30 134.4 98 71.4
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 1.6e-29 133.7 110 66.4
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 2.0e-29 133.3 98 71.4
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.7e-29 132.9 93 76.3
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 3.5e-29 132.5 122 62.3
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 4.5e-29 132.1 113 64.6
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 5.9e-29 131.7 117 63.2
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 7.7e-29 131.3 105 65.7
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 1.0e-28 131.0 94 74.5
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 2.9e-28 129.4 102 70.6
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.5e-27 127.1 92 73.9
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 1.9e-27 126.7 100 67.0
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 2.5e-27 126.3 112 63.4
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 2.1e-26 123.2 101 63.4
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 2.7e-26 122.9 108 58.3
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 4.7e-26 122.1 92 69.6
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 6.1e-26 121.7 89 70.8
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 1.4e-25 120.6 87 71.3
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.8e-25 120.2 101 62.4
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 3.0e-25 119.4 120 55.8
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 5.2e-25 118.6 121 53.7
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 6.8e-25 118.2 84 73.8
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 2.6e-24 116.3 127 53.5
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 5.7e-24 115.2 105 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 9.8e-24 114.4 127 53.5
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 9.8e-24 114.4 90 66.7
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 2.2e-23 113.2 95 63.2
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 1.1e-22 110.9 111 54.1
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 2.9e-20 102.8 109 50.5
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 4.2e-19 99.0 111 46.8
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 4.0e-17 92.4 92 62.0
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 4.9e-15 85.5 113 40.7
COL.COLO4_19857 Corchorus olitorius HOM05D006639 ORTHO05D008339 2.1e-10 70.1 54 68.5
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 8.0e-10 68.2 59 62.7
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.8e-09 67.0 57 63.2
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 65.5 91 49.5
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 65.5 57 63.2
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 5.2e-09 65.5 91 49.5
Ah.04g154910 Amaranthus hybridus HOM05D006639 ORTHO05D061627 8.9e-09 64.7 40 82.5
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 1.2e-08 64.3 48 66.7
Lalb_Chr03g0028111 Lupinus albus HOM05D006639 ORTHO05D008339 3.2e-06 56.2 40 72.5
ATR0706G034 Amborella trichopoda HOM05D000297 ORTHO05D000193 9.2e-06 54.7 102 34.3


User provided reference genes

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