Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 5.6e-148 527.7 292 100.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.8e-82 310.1 309 62.1
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.7e-80 303.5 305 61.0
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 9.8e-76 287.7 324 55.9
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.0e-73 280.0 310 56.1
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.1e-66 257.7 309 54.4
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.1e-66 257.7 309 54.4
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.5e-60 237.3 305 51.1
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 2.8e-54 216.5 192 62.0
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 3.6e-54 216.1 184 65.2
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 8.1e-54 214.9 181 64.1
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 2.3e-53 213.4 154 69.5
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.1e-53 213.0 134 82.1
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 3.4e-52 209.5 302 45.0
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 5.8e-52 208.8 178 62.4
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 5.8e-52 208.8 155 67.1
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 9.9e-52 208.0 167 64.1
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.3e-51 207.6 148 70.9
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 2.2e-51 206.8 194 58.8
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 3.2e-50 203.0 189 57.7
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 4.1e-50 202.6 300 43.3
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 7.1e-50 201.8 141 71.6
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 7.1e-50 201.8 307 42.3
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 7.1e-50 201.8 295 43.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.2e-49 201.1 178 60.7
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.6e-49 200.7 178 61.2
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 1.6e-49 200.7 149 67.8
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 1.6e-49 200.7 178 62.9
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 2.1e-49 200.3 251 48.6
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 2.7e-49 199.9 264 47.3
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 2.7e-49 199.9 148 68.2
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 3.5e-49 199.5 141 72.3
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 4.6e-49 199.1 203 55.2
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 4.6e-49 199.1 184 59.2
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 4.6e-49 199.1 184 59.2
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 6.0e-49 198.7 296 42.9
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 1.0e-48 198.0 201 56.7
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 1.3e-48 197.6 185 58.4
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.3e-48 197.6 150 66.7
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.7e-48 197.2 292 46.6
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 2.3e-48 196.8 183 55.7
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 2.3e-48 196.8 293 47.1
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 3.0e-48 196.4 148 64.9
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.9e-48 196.1 313 40.9
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.9e-48 196.1 255 45.5
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 6.6e-48 195.3 300 45.7
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.1e-47 194.5 198 57.1
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.1e-47 194.5 301 46.8
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.5e-47 193.4 289 44.3
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 2.5e-47 193.4 150 66.0
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 3.3e-47 193.0 205 53.7
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 3.3e-47 193.0 255 45.1
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 4.3e-47 192.6 150 67.3
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 4.3e-47 192.6 150 67.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 4.3e-47 192.6 150 67.3
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 4.3e-47 192.6 150 67.3
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 5.6e-47 192.2 193 53.4
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 7.3e-47 191.8 296 43.2
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.2e-46 191.0 293 40.6
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 1.6e-46 190.7 150 66.7
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 2.1e-46 190.3 315 43.5
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 8.1e-46 188.3 327 39.1
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.1e-45 188.0 182 56.6
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.4e-45 187.6 165 61.8
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.4e-45 187.6 165 61.8
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.4e-45 187.6 288 41.3
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.8e-45 187.2 197 53.8
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 3.1e-45 186.4 307 42.7
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 5.2e-45 185.7 182 56.0
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 6.9e-45 185.3 256 46.5
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 6.9e-45 185.3 148 61.5
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 1.2e-44 184.5 148 66.2
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.5e-44 184.1 179 58.1
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 2.6e-44 183.3 203 52.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 3.4e-44 183.0 132 68.9
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 3.4e-44 183.0 134 69.4
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 9.9e-44 181.4 298 44.0
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.3e-43 181.0 246 46.3
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.7e-43 180.6 132 68.2
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.7e-43 180.6 141 68.1
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 2.2e-43 180.3 178 55.6
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 2.9e-43 179.9 300 43.7
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.8e-43 179.5 182 59.9
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.8e-43 179.5 182 59.9
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 8.4e-43 178.3 134 64.9
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 8.4e-43 178.3 141 64.5
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.1e-42 177.9 140 64.3
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 1.4e-42 177.6 300 41.7
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.9e-42 177.2 165 61.2
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 2.4e-42 176.8 203 50.7
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 2.4e-42 176.8 136 69.1
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 4.2e-42 176.0 132 68.2
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 9.3e-42 174.9 297 43.8
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 9.3e-42 174.9 148 59.5
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.2e-41 174.5 196 50.5
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.2e-41 174.5 246 46.3
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 1.6e-41 174.1 188 51.1
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 4.6e-41 172.6 199 50.8
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 4.6e-41 172.6 149 63.8
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 6.0e-41 172.2 174 55.2
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 7.8e-41 171.8 316 38.9
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.0e-40 171.4 294 43.2
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.7e-40 170.6 311 39.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.7e-40 170.6 178 55.1
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 5.1e-40 169.1 145 60.0
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.5e-39 166.8 189 53.4
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 3.3e-39 166.4 210 48.6
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 5.6e-39 165.6 177 53.1
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 5.6e-39 165.6 153 58.2
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 7.3e-39 165.2 280 41.1
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 9.6e-39 164.9 287 38.0
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.4e-37 160.2 145 58.6
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.0e-37 159.5 153 56.9
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 4.0e-37 159.5 153 56.9
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 6.9e-37 158.7 136 64.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.2e-36 157.9 132 61.4
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.2e-36 157.9 181 50.3
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 4.5e-36 156.0 314 38.2
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 5.8e-36 155.6 276 39.9
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 9.9e-36 154.8 164 53.7
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.7e-35 154.1 328 35.4
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 2.7e-33 146.7 147 53.7
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 7.9e-33 145.2 90 83.3
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 6.7e-32 142.1 159 48.4
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 9.6e-31 138.3 160 49.4
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 6.2e-30 135.6 153 52.9
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.8e-29 134.0 144 53.5
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.8e-29 134.0 185 44.3
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 4.0e-29 132.9 104 65.4
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.5e-28 129.4 154 48.1
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.3e-27 127.9 102 68.6
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 9.3e-26 121.7 131 48.1
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.7e-25 120.2 123 54.5
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 1.5e-23 114.4 262 36.6
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 5.8e-20 102.4 136 43.4
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.8e-20 102.4 107 49.5
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.8e-13 80.9 135 38.5
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 3.1e-13 80.1 83 57.8
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 2.6e-12 77.0 89 50.6
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 3.4e-12 76.6 185 33.0
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 2.9e-11 73.6 100 47.0
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.9e-10 70.9 141 33.3
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 5.5e-10 69.3 135 31.1
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 1.9e-07 60.8 57 56.1


User provided reference genes

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