Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.15g094730 Amaranthus hybridus HOM05D001270 ORTHO05D001099 9.2e-22 105.9 51 100.0
EL10Ac7g18231 Beta vulgaris HOM05D001270 ORTHO05D001099 1.0e-20 102.4 51 96.1
AUR62001374 Chenopodium quinoa HOM05D001270 ORTHO05D001099 1.0e-20 102.4 51 96.1
AUR62025590 Chenopodium quinoa HOM05D001270 ORTHO05D001099 1.0e-20 102.4 51 96.1
Ah.08g217560 Amaranthus hybridus HOM05D001270 ORTHO05D001099 1.8e-17 91.7 51 88.2
Sc15g0000910 Simmondsia chinensis HOM05D001270 ORTHO05D001099 2.4e-17 91.3 51 86.3
Hund05688 Selenicereus undatus HOM05D001270 ORTHO05D001099 1.4e-14 82.0 51 78.4
FvH4_6g37400 Fragaria vesca HOM05D001270 ORTHO05D001099 8.1e-10 66.2 51 66.7
FAN02G2484 Fragaria x ananassa HOM05D001270 ORTHO05D001099 8.1e-10 66.2 51 66.7
FAN05G5284 Fragaria x ananassa HOM05D001270 ORTHO05D001099 8.1e-10 66.2 51 66.7
FAN09G0450 Fragaria x ananassa HOM05D001270 ORTHO05D001099 8.1e-10 66.2 51 66.7
FAN14G1090 Fragaria x ananassa HOM05D001270 ORTHO05D001099 8.1e-10 66.2 51 66.7
CANSAT01G0064 Cannabis sativa HOM05D001270 ORTHO05D001099 5.3e-09 63.5 51 62.7
Prupe.3G167600 Prunus persica HOM05D001270 ORTHO05D001099 5.3e-09 63.5 51 62.7
MD17G1144400 Malus domestica HOM05D001270 ORTHO05D001099 6.9e-09 63.2 51 62.7
Sabra10G0194400 Salix brachista HOM05D001270 ORTHO05D001099 9.0e-09 62.8 52 67.3
MD09G1158400 Malus domestica HOM05D001270 ORTHO05D001099 1.2e-08 62.4 51 60.8
Cpa.g.sc173.11 Carica papaya HOM05D001270 ORTHO05D001099 1.5e-08 62.0 51 62.7
Rhsim08G0247800 Rhododendron simsii HOM05D001270 ORTHO05D001099 2.6e-08 61.2 56 62.5
RcHm_v2.0_Chr2g0150201 Rosa chinensis HOM05D001270 ORTHO05D001099 3.4e-08 60.8 47 66.0
Eucgr.F04008 Eucalyptus grandis HOM05D001270 ORTHO05D001099 7.6e-08 59.7 51 58.8
Potri.008G009100 Populus trichocarpa HOM05D001270 ORTHO05D001099 9.9e-08 59.3 52 63.5
Potri.010G249900 Populus trichocarpa HOM05D001270 ORTHO05D001099 9.9e-08 59.3 52 63.5
Sed0004296 Sechium edule HOM05D001270 ORTHO05D001099 9.9e-08 59.3 51 56.9
Glyma.08G223000 Glycine max HOM05D001270 ORTHO05D001099 1.3e-07 58.9 51 58.8
Sabra08G0005200 Salix brachista HOM05D001270 ORTHO05D001099 1.3e-07 58.9 38 71.1
TWI12G0046 Tripterygium wilfordii HOM05D001270 ORTHO05D001099 1.3e-07 58.9 52 59.6
TWI18G0399 Tripterygium wilfordii HOM05D001270 ORTHO05D001099 1.3e-07 58.9 52 59.6
vmacro18762 Vaccinium macrocarpon HOM05D001270 ORTHO05D001099 1.3e-07 58.9 56 60.7
PGR102G0119 Punica granatum HOM05D001270 ORTHO05D001099 2.2e-07 58.2 51 56.9
VMungo0647G0339 Vigna mungo HOM05D001270 ORTHO05D001099 2.9e-07 57.8 51 58.8
Manes.04G064700 Manihot esculenta HOM05D001270 ORTHO05D001099 3.8e-07 57.4 51 60.8
QL05p083372 Quercus lobata HOM05D001270 ORTHO05D001099 3.8e-07 57.4 51 51.0
THA.LOC104806641 Tarenaya hassleriana HOM05D001270 ORTHO05D001099 3.8e-07 57.4 51 56.9
CiPaw.01G088400 Carya illinoinensis HOM05D001270 ORTHO05D001099 4.9e-07 57.0 51 56.9
ClCG09G001470 Citrullus lanatus HOM05D001270 ORTHO05D001099 4.9e-07 57.0 51 54.9
MELO3C024298.2 Cucumis melo HOM05D001270 ORTHO05D001099 6.4e-07 56.6 51 56.9
CsaV3_7G033850 Cucumis sativus L. HOM05D001270 ORTHO05D001099 6.4e-07 56.6 51 56.9
Glyma.07G003600 Glycine max HOM05D001270 ORTHO05D001099 8.4e-07 56.2 51 56.9
Dinv37800 Davidia involucrata HOM05D001270 ORTHO05D001099 1.1e-06 55.8 56 57.1
Hma1.2p1_1104F.1_g257390 Hydrangea macrophylla HOM05D001270 ORTHO05D001099 1.1e-06 55.8 56 57.1
Nitab4.5_0002885g0100 Nicotiana tabacum HOM05D001270 ORTHO05D001099 1.1e-06 55.8 56 55.4
Phvul.008G256000 Phaseolus vulgaris HOM05D001270 ORTHO05D001099 1.1e-06 55.8 51 54.9
Thecc.06G015900 Theobroma cacao HOM05D001270 ORTHO05D001099 1.1e-06 55.8 51 52.9
arahy.Tifrunner.gnm1.ann1.VCXV2P Arachis hypogaea HOM05D001270 ORTHO05D001099 1.4e-06 55.5 51 54.9
arahy.Tifrunner.gnm1.ann1.Z4J9LG Arachis hypogaea HOM05D001270 ORTHO05D001099 1.4e-06 55.5 51 54.9
CAN.G790.26 Capsicum annuum HOM05D001270 ORTHO05D001099 1.4e-06 55.5 56 53.6
THA.LOC104800315 Tarenaya hassleriana HOM05D001270 ORTHO05D001099 1.4e-06 55.5 51 54.9
Solyc03g123870.3 Solanum lycopersicum HOM05D001270 ORTHO05D001099 3.2e-06 54.3 56 53.6
PGSC0003DMG401009187 Solanum tuberosum HOM05D001270 ORTHO05D001099 3.2e-06 54.3 56 53.6
CiPaw.02G051100 Carya illinoinensis HOM05D001270 ORTHO05D001099 4.2e-06 53.9 51 54.9
Gohir.A05G113600 Gossypium hirsutum HOM05D001270 ORTHO05D001099 4.2e-06 53.9 51 54.9
Gohir.D05G114000 Gossypium hirsutum HOM05D001270 ORTHO05D001099 5.4e-06 53.5 51 54.9
Gorai.009G118000 Gossypium raimondii HOM05D001270 ORTHO05D001099 5.4e-06 53.5 51 54.9
Sopen03g041610 Solanum pennellii HOM05D001270 ORTHO05D001099 7.1e-06 53.1 56 53.6
Thecc.06G016100 Theobroma cacao HOM05D001270 ORTHO05D001099 9.3e-06 52.8 51 51.0


User provided reference genes

Program Settings