Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g089700 Amaranthus hybridus HOM05D011834 ORTHO05D000563 1.1e-44 183.0 92 100.0
SHI40194 Sapria himalayana HOM05D000004 ORTHO05D000563 1.0e-07 60.1 69 43.5
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 1.4e-07 59.7 75 42.7
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-07 58.5 55 49.1
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 3.0e-07 58.5 69 43.5
PGR119G1806 Punica granatum HOM05D000004 ORTHO05D000563 4.0e-07 58.2 55 49.1
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-07 57.8 55 49.1
ECA246G2655 Erigeron canadensis HOM05D000004 ORTHO05D009927 6.8e-07 57.4 80 41.2
PGR044G1270 Punica granatum HOM05D000004 ORTHO05D000002 6.8e-07 57.4 55 49.1
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 6.8e-07 57.4 55 49.1
Cpa.g.sc0.42 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 56.6 67 41.8
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-06 56.6 54 48.1
Atru.chr11.550 Acer truncatum HOM05D000004 ORTHO05D000563 1.5e-06 56.2 58 50.0
Cpa.g.sc101.17 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 56.2 71 42.3
Cpa.g.sc60.41 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-06 56.2 70 40.0
SpUn0005_0290 Schrenkiella parvula HOM05D011834 ORTHO05D013625 1.5e-06 56.2 66 50.0
SpUn0150_0030 Schrenkiella parvula HOM05D011834 ORTHO05D013625 1.5e-06 56.2 66 50.0
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-06 55.8 74 41.9
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-06 55.8 58 43.1
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-06 55.5 74 37.8
FvH4_2g19252 Fragaria vesca HOM05D000004 ORTHO05D000002 2.6e-06 55.5 59 42.4
Sp1g33040 Schrenkiella parvula HOM05D008042 ORTHO05D000563 2.6e-06 55.5 57 49.1
Atru.chr7.449 Acer truncatum HOM05D000004 ORTHO05D000563 3.4e-06 55.1 75 45.3
Cpa.g.sc210.2 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-06 55.1 75 40.0
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 3.4e-06 55.1 75 40.0
Cpa.g.sc174.2 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-06 54.7 73 39.7
Cpa.g.sc39.67 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-06 54.7 71 39.4
THA.LOC104818561 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-06 54.7 58 48.3
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.7e-06 54.3 73 37.0
THA.LOC109117272 Tarenaya hassleriana HOM05D028373 ORTHO05D000563 5.7e-06 54.3 66 42.4
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-06 53.9 59 37.3
Cpa.g.sc305.2 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-06 53.9 54 42.6
Cpa.g.sc4640.1 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-06 53.9 54 44.4
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 7.5e-06 53.9 55 43.6
Hma1.2p1_1923F.1_g307620 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 7.5e-06 53.9 55 43.6
SpUn0002_0410 Schrenkiella parvula HOM05D008042 ORTHO05D000563 7.5e-06 53.9 57 49.1
SpUn0016_0130 Schrenkiella parvula HOM05D008042 ORTHO05D000563 7.5e-06 53.9 66 48.5
SpUn0112_0020 Schrenkiella parvula HOM05D008042 ORTHO05D000563 7.5e-06 53.9 66 48.5
THA.LOC104804721 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.5e-06 53.9 66 42.4
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-06 53.5 74 41.9
PGR125G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.8e-06 53.5 61 42.6
Sp7g05160 Schrenkiella parvula HOM05D008211 ORTHO05D000563 9.8e-06 53.5 57 47.4
SpUn0016_0100 Schrenkiella parvula HOM05D008042 ORTHO05D000563 9.8e-06 53.5 69 44.9
SpUn0041_0060 Schrenkiella parvula HOM05D008042 ORTHO05D000563 9.8e-06 53.5 69 44.9
THA.LOC109115993 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.8e-06 53.5 75 40.0


User provided reference genes

Program Settings