Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 0.0e+00 1196.0 624 100.0
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 5.8e-219 764.6 638 68.0
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 6.9e-212 741.1 631 66.7
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.6e-211 739.2 631 66.2
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 1.4e-175 620.5 643 58.9
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 6.6e-154 548.5 641 54.1
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 7.3e-137 491.9 654 49.7
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 4.0e-135 486.1 653 48.1
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 1.3e-133 481.1 653 47.9
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.3e-133 481.1 653 49.3
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 5.4e-132 475.7 663 48.7
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 2.1e-131 473.8 658 47.9
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 2.3e-130 470.3 652 47.7
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.3e-130 470.3 655 47.8
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.0e-130 469.9 660 47.7
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 5.1e-130 469.2 648 48.6
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.5e-129 466.8 662 47.4
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.8e-127 460.7 652 46.6
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 4.4e-126 456.1 655 46.7
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 5.8e-126 455.7 683 44.9
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 7.6e-126 455.3 662 45.5
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 7.6e-126 455.3 661 46.4
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 6.4e-125 452.2 651 45.9
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 1.1e-124 451.4 692 45.7
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 3.2e-124 449.9 660 46.8
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 7.1e-124 448.7 664 46.1
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 7.1e-124 448.7 656 47.4
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.6e-123 447.6 653 46.4
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 5.1e-122 442.6 659 46.7
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.5e-121 441.0 662 45.8
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.1e-120 437.2 645 47.6
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.1e-120 437.2 645 47.6
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 2.4e-119 433.7 660 46.2
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 6.9e-119 432.2 660 46.2
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.7e-117 427.6 644 46.4
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.1e-116 424.9 706 43.8
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 5.4e-116 422.5 676 43.8
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 1.6e-115 421.0 608 46.4
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.0e-114 416.8 664 44.6
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.5e-113 413.7 682 42.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 3.7e-112 409.8 674 42.3
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.4e-111 407.9 654 44.8
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 1.4e-111 407.9 674 43.3
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.2e-110 404.8 668 43.9
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 1.5e-110 404.4 671 43.5
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.7e-109 401.0 660 43.0
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 8.4e-109 398.7 668 41.6
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 1.1e-108 398.3 677 42.8
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.4e-108 397.9 671 42.5
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 1.4e-108 397.9 660 44.4
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 4.6e-107 392.9 657 43.1
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 4.6e-107 392.9 662 42.7
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 3.9e-106 389.8 671 42.5
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 4.3e-105 386.3 656 43.4
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.6e-104 384.4 661 44.6
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 2.1e-104 384.0 654 43.6
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 2.8e-104 383.6 658 43.5
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 2.8e-104 383.6 714 40.6
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 4.8e-104 382.9 650 43.1
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 5.3e-103 379.4 696 42.2
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.2e-102 378.3 657 44.1
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.8e-102 375.9 652 42.5
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 7.6e-102 375.6 643 42.0
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 6.5e-101 372.5 670 42.7
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 4.2e-100 369.8 657 42.3
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.2e-99 368.2 650 42.5
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.8e-98 364.4 642 42.5
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 5.7e-97 359.4 662 42.7
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 2.8e-96 357.1 662 42.6
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 4.1e-95 353.2 659 41.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.5e-94 351.3 680 40.4
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.6e-94 350.5 609 41.2
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 9.4e-92 342.0 625 41.8
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 9.4e-92 342.0 658 41.8
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.6e-91 341.3 658 40.3
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 2.1e-91 340.9 650 40.8
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 3.0e-90 337.0 659 40.4
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 8.8e-90 335.5 557 42.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.5e-89 334.7 657 40.5
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.0e-89 334.3 546 44.0
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.0e-89 334.3 665 40.8
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 4.1e-87 326.6 675 37.6
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 1.4e-84 318.2 641 38.5
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 4.2e-84 316.6 644 39.3
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.5e-84 316.2 653 39.4
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.2e-83 315.1 501 44.9
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.3e-80 305.1 662 39.6
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.7e-80 304.7 452 46.0
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.4e-79 300.8 641 38.5
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 4.5e-78 296.6 712 38.1
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.9e-76 291.2 654 36.9
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.1e-75 287.7 640 37.7
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.3e-74 284.3 531 40.7
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 3.0e-74 283.9 647 38.8
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 3.0e-74 283.9 648 36.3
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.1e-73 282.0 644 38.2
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.0e-73 281.2 468 41.2
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 3.3e-73 280.4 498 40.2
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 4.4e-73 280.0 600 38.3
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 9.7e-73 278.9 662 37.8
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.8e-72 277.3 645 38.4
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.3e-72 276.2 501 38.3
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 6.3e-72 276.2 645 38.3
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 6.3e-72 276.2 655 39.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 8.2e-72 275.8 768 34.0
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.1e-71 275.4 642 37.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.8e-71 274.6 640 38.3
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 9.1e-71 272.3 455 44.2
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.0e-69 268.9 698 35.1
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 6.5e-69 266.2 647 38.0
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 8.5e-69 265.8 688 34.2
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.1e-68 265.4 656 37.5
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 5.5e-68 263.1 629 37.7
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.6e-67 261.5 649 37.3
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 2.8e-64 250.8 644 37.3
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.6e-59 235.0 484 39.0
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 4.0e-58 230.3 472 40.0
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 1.2e-57 228.8 376 42.8
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 3.4e-57 227.3 651 32.4
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.4e-55 221.9 474 39.7
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 4.5e-54 216.9 643 33.9
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 7.7e-54 216.1 447 38.9
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.9e-52 211.5 749 32.0
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.1e-47 195.7 445 38.9
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.8e-43 181.0 168 61.9
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 9.2e-39 166.0 195 50.3
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 9.8e-33 146.0 116 68.1
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 6.0e-30 136.7 711 28.7
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.0e-29 136.0 231 44.2
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 1.1e-23 115.9 427 30.9
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 3.6e-19 100.9 197 38.1
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 3.1e-18 97.8 974 23.0
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 6.4e-16 90.1 84 61.9
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 7.1e-15 86.7 184 33.7
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 3.5e-14 84.3 124 45.2
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 4.6e-14 84.0 907 23.6
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 2.1e-11 75.1 150 38.7
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 5.3e-10 70.5 252 30.2
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 7.1e-07 60.1 104 40.4


User provided reference genes

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