Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.2e-135 486.5 248 100.0
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 7.2e-128 460.7 246 93.5
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 9.4e-128 460.3 246 93.5
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 2.7e-127 458.8 248 92.7
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.4
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.4
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 91.4
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.0
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.7e-124 449.5 245 91.4
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.7e-124 449.5 245 91.4
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 2.8e-124 448.7 248 89.9
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 91.4
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 91.0
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.1e-123 446.8 245 91.0
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 1.4e-123 446.4 245 90.6
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 1.8e-123 446.0 248 89.9
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 3.1e-123 445.3 245 90.2
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 4.1e-123 444.9 243 91.4
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 4.1e-123 444.9 245 89.0
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 7.0e-123 444.1 248 88.7
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 7.0e-123 444.1 246 89.4
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 9.1e-123 443.7 246 89.0
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 89.0
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.6e-122 442.2 248 88.7
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 3.4e-122 441.8 246 89.0
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 3.4e-122 441.8 246 89.4
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 5.9e-122 441.0 246 88.2
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 7.7e-122 440.7 246 89.4
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 90.2
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 90.2
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.0e-121 440.3 246 88.2
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 1.0e-121 440.3 246 89.4
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 89.8
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.3e-121 439.9 245 89.8
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 89.4
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.9e-121 438.7 246 88.2
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 5.0e-121 438.0 246 88.2
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 5.0e-121 438.0 246 88.2
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 5.0e-121 438.0 245 87.8
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 6.5e-121 437.6 246 88.2
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 6.5e-121 437.6 246 89.8
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 89.4
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 88.2
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 6.5e-121 437.6 243 89.3
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 8.5e-121 437.2 245 87.8
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 8.5e-121 437.2 245 89.4
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 8.5e-121 437.2 245 89.4
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.6
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.1e-120 436.8 246 89.0
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 1.1e-120 436.8 246 88.6
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 87.3
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 246 87.8
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 246 87.8
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 1.4e-120 436.4 246 87.8
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 1.4e-120 436.4 246 87.8
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 86.9
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 88.6
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 88.6
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 88.2
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 1.9e-120 436.0 244 88.9
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 87.0
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 87.4
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 87.4
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 2.5e-120 435.6 246 87.4
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 2.5e-120 435.6 244 89.8
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.5e-120 435.6 245 87.3
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 3.2e-120 435.3 246 87.4
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 3.2e-120 435.3 246 87.0
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 3.2e-120 435.3 246 88.6
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.7
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.7
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 4.2e-120 434.9 246 87.8
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 4.2e-120 434.9 245 88.6
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 87.8
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 5.5e-120 434.5 246 87.4
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 88.6
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 5.5e-120 434.5 245 88.2
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 7.2e-120 434.1 246 87.4
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 7.2e-120 434.1 246 87.4
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 7.2e-120 434.1 245 87.3
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 88.3
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 88.3
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 7.2e-120 434.1 246 89.0
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 9.4e-120 433.7 245 88.2
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 9.4e-120 433.7 246 87.4
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 9.4e-120 433.7 246 87.4
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 1.2e-119 433.3 245 88.6
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 1.2e-119 433.3 244 88.5
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 87.8
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 87.8
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-119 433.0 246 87.0
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 1.6e-119 433.0 246 87.0
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 88.6
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 1.6e-119 433.0 247 88.3
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.1e-119 432.6 246 86.6
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 87.8
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 2.1e-119 432.6 246 87.0
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 87.9
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 2.7e-119 432.2 245 87.3
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 2.7e-119 432.2 246 86.6
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 3.6e-119 431.8 246 86.6
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.6e-119 431.8 251 86.5
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 3.6e-119 431.8 246 86.6
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 8.0e-119 430.6 246 86.6
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 1.0e-118 430.3 246 87.0
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 2.3e-118 429.1 246 85.8
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 2.3e-118 429.1 246 87.4
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 3.9e-118 428.3 245 86.9
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 6.7e-118 427.6 246 87.0
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 6.7e-118 427.6 245 86.5
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 8.8e-118 427.2 247 86.6
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 9.7e-117 423.7 246 85.0
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 1.3e-116 423.3 247 85.4
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 2.2e-116 422.5 246 85.8
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 2.8e-116 422.2 269 80.7
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 3.7e-116 421.8 235 88.9
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.4e-115 419.9 247 86.6
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 2.6e-114 415.6 246 84.6
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 3.5e-114 415.2 246 84.6
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 4.5e-114 414.8 284 76.1
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 4.5e-114 414.8 246 84.6
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 1.3e-113 413.3 246 84.1
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 1.3e-113 413.3 290 75.2
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 8.5e-113 410.6 263 79.8
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.5e-112 409.8 304 71.1
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.9e-112 409.5 245 84.9
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 1.9e-112 409.5 252 81.3
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 1.5e-109 399.8 251 78.5
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 2.0e-109 399.4 249 79.1
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 5.7e-109 397.9 254 78.0
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 1.7e-108 396.4 252 78.2
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 3.7e-108 395.2 332 64.5
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 4.1e-107 391.7 254 76.0
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 1.2e-106 390.2 214 89.7
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.7e-106 389.0 251 75.7
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 7.2e-104 380.9 264 76.5
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 6.8e-102 374.4 209 86.1
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 6.8e-102 374.4 209 86.1
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 2.0e-101 372.9 213 86.9
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 2.3e-97 359.4 359 57.4
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 8.3e-92 340.9 245 72.2
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 6.1e-87 324.7 198 85.9
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 6.8e-86 321.2 172 95.3
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.6e-85 319.3 245 69.8
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 3.4e-85 318.9 172 94.8
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 2.9e-84 315.8 247 68.8
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 1.3e-81 307.0 179 85.5
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 6.8e-78 294.7 167 86.2
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.2e-77 293.9 163 88.3
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 1.9e-72 276.6 279 55.2
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 1.7e-60 236.9 241 48.5
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 7.8e-58 228.0 138 81.2
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 3.3e-48 196.1 232 44.0
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.8e-47 192.2 245 50.2
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 2.6e-45 186.4 254 43.3
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 9.3e-43 177.9 102 85.3
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.9e-40 170.2 94 87.2
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 4.8e-39 165.6 208 51.4
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 4.6e-34 149.1 163 53.4
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 8.2e-31 138.3 140 55.7
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 1.3e-28 131.0 82 78.0
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 1.9e-27 127.1 77 80.5
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 7.9e-26 121.7 82 78.0
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 8.7e-25 118.2 212 41.5
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.1e-24 117.9 85 70.6
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 7.4e-24 115.2 229 35.4
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 6.5e-20 102.1 101 48.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 2.0e-16 90.5 57 82.5
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.7e-16 89.0 51 88.2
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.7e-15 87.4 47 85.1
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 2.8e-15 86.7 51 78.4
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 5.3e-14 82.4 74 62.2
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 2.6e-13 80.1 52 84.6
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 3.8e-12 76.3 79 54.4
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 6.7e-09 65.5 106 45.3
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 8.8e-09 65.1 94 46.8
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.5e-08 64.3 44 79.5
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 3.1e-06 56.6 87 46.0
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 4.1e-06 56.2 35 68.6
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 4.1e-06 56.2 35 68.6
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 4.1e-06 56.2 35 68.6
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 5.3e-06 55.8 98 42.9


User provided reference genes

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