Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 3.6e-112 408.3 214 100.0
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.4e-47 193.7 189 58.7
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 3.9e-37 159.1 195 53.8
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.9e-36 156.8 178 54.5
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 7.3e-36 154.8 105 77.1
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 8.0e-35 151.4 105 73.3
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.0e-34 151.0 203 50.7
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.0e-34 151.0 104 73.1
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.8e-34 150.2 105 72.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 2.3e-34 149.8 203 51.2
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 3.1e-34 149.4 105 73.3
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.0e-34 149.1 199 47.7
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 5.2e-34 148.7 105 74.3
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 5.2e-34 148.7 105 74.3
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 5.2e-34 148.7 105 74.3
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 6.8e-34 148.3 201 46.8
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.8e-34 148.3 181 50.8
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.2e-33 147.5 221 45.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.0e-33 146.7 200 47.5
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.0e-33 146.7 140 57.9
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.6e-33 146.4 113 62.8
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 2.6e-33 146.4 116 67.2
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 2.6e-33 146.4 193 49.7
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.4e-33 145.6 106 69.8
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 5.8e-33 145.2 103 65.0
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 7.5e-33 144.8 182 48.4
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 9.8e-33 144.4 179 50.3
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 9.8e-33 144.4 179 50.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 9.8e-33 144.4 185 45.4
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.3e-32 144.1 132 60.6
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.3e-32 144.1 108 68.5
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.9e-32 142.9 105 69.5
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 2.9e-32 142.9 168 48.8
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.7e-32 142.5 179 49.7
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.7e-32 142.5 194 48.5
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 4.9e-32 142.1 112 67.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.9e-32 142.1 109 65.1
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.9e-32 142.1 211 46.9
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.9e-32 142.1 211 46.9
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 4.9e-32 142.1 184 47.8
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 4.9e-32 142.1 111 63.1
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 6.4e-32 141.7 109 64.2
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 6.4e-32 141.7 179 49.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 8.3e-32 141.4 105 67.6
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 8.3e-32 141.4 112 67.9
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 8.3e-32 141.4 114 68.4
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 8.3e-32 141.4 112 67.9
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 8.3e-32 141.4 105 65.7
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 8.3e-32 141.4 132 61.4
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 8.3e-32 141.4 105 67.6
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 1.4e-31 140.6 105 67.6
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.4e-31 140.6 106 65.1
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.4e-31 140.6 176 49.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.4e-31 140.6 112 65.2
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.4e-31 140.6 112 64.3
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.9e-31 140.2 193 46.1
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 1.9e-31 140.2 179 48.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 3.2e-31 139.4 131 58.8
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 3.2e-31 139.4 105 64.8
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.2e-31 139.4 191 49.2
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 4.1e-31 139.0 195 47.2
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 4.1e-31 139.0 109 61.5
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 7.0e-31 138.3 112 60.7
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 9.2e-31 137.9 197 47.2
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 9.2e-31 137.9 94 73.4
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.0e-30 136.7 103 67.0
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.0e-30 136.7 99 68.7
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.7e-30 136.3 197 46.7
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.6e-30 135.6 112 62.5
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 4.6e-30 135.6 112 61.6
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.7e-29 133.7 170 48.8
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.7e-29 133.7 110 60.0
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.7e-29 133.7 179 46.9
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.7e-29 133.7 104 65.4
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 3.0e-29 132.9 106 61.3
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.9e-29 132.5 199 44.7
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 8.6e-29 131.3 106 60.4
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.1e-28 131.0 203 44.3
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 3.3e-28 129.4 97 69.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.3e-28 129.4 202 47.5
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.3e-28 129.4 202 47.5
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 3.3e-28 129.4 158 51.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 9.5e-28 127.9 95 66.3
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 9.5e-28 127.9 105 61.9
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.1e-26 124.4 96 66.7
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 6.8e-26 121.7 91 67.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.6e-25 119.8 102 59.8
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 4.4e-25 119.0 99 62.6
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 7.5e-25 118.2 183 44.8
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 7.5e-25 118.2 211 41.7
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 3.7e-24 115.9 94 54.3
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 4.9e-24 115.5 90 63.3
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.9e-23 113.6 92 63.0
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 7.8e-22 108.2 130 50.8
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.7e-21 107.1 72 73.6
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 6.6e-21 105.1 75 68.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 1.9e-20 103.6 83 54.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 5.6e-20 102.1 92 58.7
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 8.1e-19 98.2 76 65.8
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.2e-17 94.4 149 34.9
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 2.4e-15 86.7 174 39.1
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-14 82.8 84 45.2
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 3.5e-14 82.8 60 66.7
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.2e-07 59.3 40 67.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.4e-07 58.9 44 65.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 9.3e-07 58.2 177 33.3


User provided reference genes

Program Settings