Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.1e-176 623.2 334 100.0
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.8e-137 493.0 352 77.6
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 7.9e-114 414.5 330 66.4
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.3e-105 386.3 349 57.9
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 6.5e-92 341.7 349 53.3
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 4.5e-85 318.9 350 51.4
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 5.6e-83 312.0 349 51.0
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 5.7e-80 302.0 336 50.6
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 7.5e-72 275.0 352 45.7
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 3.6e-66 256.1 352 44.0
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.0e-64 250.4 353 44.2
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 2.0e-64 250.4 363 44.1
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 4.0e-57 226.1 363 42.1
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.7e-37 160.2 347 31.7
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 2.5e-35 153.7 347 31.1
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 5.6e-35 152.5 346 33.8
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 6.2e-34 149.1 250 39.2
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.4e-33 147.1 347 30.3
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 3.1e-33 146.7 343 31.2
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 4.0e-33 146.4 345 30.1
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 5.8e-32 142.5 343 30.6
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 3.8e-31 139.8 347 30.3
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 3.8e-31 139.8 348 29.3
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 6.4e-31 139.0 282 34.4
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 2.4e-30 137.1 351 29.9
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 1.2e-29 134.8 347 27.7
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 2.1e-29 134.0 347 28.5
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 7.9e-29 132.1 347 30.5
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 3.0e-28 130.2 348 30.2
AUR62031148 Chenopodium quinoa HOM05D008906 ORTHO05D010752 9.6e-27 125.2 294 36.4
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 1.1e-17 95.1 374 25.4
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.8e-17 94.4 406 24.9
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 2.0e-16 90.9 384 22.1
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 1.7e-15 87.8 152 34.2
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 7.9e-13 79.0 188 30.3
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 4.8e-10 69.7 324 25.6
Sc06g0005950 Simmondsia chinensis HOM05D014687 ORTHO05D010752 5.9e-08 62.8 172 27.3
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.2e-07 60.8 308 25.0
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 5.5e-06 56.2 403 22.1


User provided reference genes

Program Settings