Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 1.3e-178 629.8 366 100.0
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 2.9e-141 505.8 352 77.6
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 9.0e-111 404.4 363 58.7
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 7.1e-108 394.8 363 62.0
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 7.4e-105 384.8 363 60.6
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 6.3e-96 355.1 365 57.3
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 1.7e-93 347.1 355 55.2
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 9.1e-87 324.7 336 54.8
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 3.6e-75 286.2 366 45.1
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 2.0e-73 280.4 366 47.0
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 1.4e-66 257.7 370 44.1
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.0e-66 256.5 358 45.5
Zm00001eb137390 Zea mays HOM05D008906 ORTHO05D010752 1.2e-59 234.6 371 42.0
EL10Ac6g13638 Beta vulgaris HOM05D008906 ORTHO05D010752 6.8e-42 175.6 255 41.2
EL10Ac6g13636 Beta vulgaris HOM05D008906 ORTHO05D010752 2.0e-41 174.1 361 37.7
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 5.4e-39 166.0 356 32.9
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 3.9e-37 159.8 351 30.8
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 6.2e-35 152.5 353 29.7
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 1.4e-34 151.4 353 30.0
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 3.1e-34 150.2 355 39.7
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 8.9e-34 148.7 349 30.1
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.5e-33 147.9 353 29.5
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 1.5e-33 147.9 353 29.5
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.7e-32 144.4 353 29.5
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 8.3e-32 142.1 353 28.0
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 1.4e-31 141.4 285 32.6
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 1.2e-30 138.3 353 27.8
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 1.0e-29 135.2 357 27.7
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 8.6e-29 132.1 364 28.8
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 1.9e-20 104.4 384 26.8
AUR62031148 Chenopodium quinoa HOM05D008906 ORTHO05D010752 2.8e-19 100.5 280 31.8
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 8.1e-19 99.0 389 22.6
Sc05g0004700 Simmondsia chinensis HOM05D014687 ORTHO05D010752 9.3e-15 85.5 272 26.8
Sc08g0007420 Simmondsia chinensis HOM05D014687 ORTHO05D010752 1.9e-12 77.8 264 25.8
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 9.0e-10 68.9 152 30.3
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 1.2e-09 68.6 183 35.0
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 2.6e-09 67.4 296 24.0
Sc06g0005950 Simmondsia chinensis HOM05D014687 ORTHO05D010752 9.9e-09 65.5 223 25.6
Sc08g0007400 Simmondsia chinensis HOM05D014687 ORTHO05D010752 7.1e-07 59.3 302 22.5


User provided reference genes

Program Settings