Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g086820 Amaranthus hybridus HOM05D000355 ORTHO05D000227 9.2e-69 263.5 136 100.0
Ah.09g233040 Amaranthus hybridus HOM05D000355 ORTHO05D000227 2.5e-50 202.2 136 81.6
Oeu021539.1 Olea europaea HOM05D000355 ORTHO05D000227 1.1e-10 70.5 143 39.2
Manes.15G116100 Manihot esculenta HOM05D000355 ORTHO05D000227 2.2e-09 66.2 136 40.4
CARHR128400 Cardamine hirsuta HOM05D000355 ORTHO05D000227 2.8e-09 65.9 146 40.4
A05p11340 Brassica napus HOM05D000355 ORTHO05D000227 6.3e-09 64.7 140 39.3
BraA05t20083Z Brassica rapa HOM05D000355 ORTHO05D000227 6.3e-09 64.7 140 39.3
Cpa.g.sc17.164 Carica papaya HOM05D000355 ORTHO05D000227 8.2e-09 64.3 138 38.4
EL10Ac8g19818 Beta vulgaris HOM05D014368 ORTHO05D017256 1.8e-08 63.2 150 35.3
C04p14700 Brassica napus HOM05D000355 ORTHO05D000227 1.8e-08 63.2 140 40.0
BolC4t23049H Brassica oleracea HOM05D000355 ORTHO05D000227 1.8e-08 63.2 140 40.0
PSO675G3834 Papaver somniferum HOM05D000355 ORTHO05D000227 2.4e-08 62.8 90 46.7
Actinidia16758 Actinidia chinensis HOM05D000355 ORTHO05D000227 3.1e-08 62.4 137 38.7
BcaC02g11498 Brassica carinata HOM05D000355 ORTHO05D000227 4.1e-08 62.0 140 38.6
Cc09_g10000 Coffea canephora HOM05D000355 ORTHO05D000227 5.3e-08 61.6 149 37.6
Oeu021540.1 Olea europaea HOM05D000355 ORTHO05D000227 5.3e-08 61.6 138 39.1
CSS0049567 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 9.1e-08 60.8 142 40.8
Thhalv10017404m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 9.1e-08 60.8 147 39.5
Sp4g16600 Schrenkiella parvula HOM05D000355 ORTHO05D000227 1.2e-07 60.5 153 39.9
BcaB02g09559 Brassica carinata HOM05D000355 ORTHO05D000227 1.5e-07 60.1 143 37.1
BolC4t27837H Brassica oleracea HOM05D000355 ORTHO05D000227 1.5e-07 60.1 149 37.6
PGSC0003DMG400013466 Solanum tuberosum HOM05D000355 ORTHO05D000227 2.0e-07 59.7 147 36.7
THA.LOC104812655 Tarenaya hassleriana HOM05D000355 ORTHO05D000227 3.4e-07 58.9 141 40.4
AL4G30290 Arabidopsis lyrata HOM05D000355 ORTHO05D000227 5.9e-07 58.2 142 38.7
MSTRG.16191 Avicennia marina HOM05D000355 ORTHO05D000227 5.9e-07 58.2 146 37.7
PGSC0003DMG400013467 Solanum tuberosum HOM05D000355 ORTHO05D000227 5.9e-07 58.2 147 36.7
Ah.09g233030 Amaranthus hybridus HOM05D014368 ORTHO05D017256 7.7e-07 57.8 137 39.4
AUR62035825 Chenopodium quinoa HOM05D014368 ORTHO05D017256 7.7e-07 57.8 148 37.8
Thecc.06G159900 Theobroma cacao HOM05D000355 ORTHO05D000227 7.7e-07 57.8 148 37.2
Thhalv10009054m.g Eutrema salsugineum HOM05D000355 ORTHO05D000227 1.0e-06 57.4 147 33.3
CSS0043298 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 1.7e-06 56.6 138 37.0
CAN.G638.18 Capsicum annuum HOM05D000355 ORTHO05D000227 2.2e-06 56.2 142 34.5
Migut.M00972 Erythranthe guttata HOM05D000355 ORTHO05D000227 2.2e-06 56.2 148 37.2
A04p26300 Brassica napus HOM05D000355 ORTHO05D000227 2.9e-06 55.8 149 36.9
BraA07t28844Z Brassica rapa HOM05D000355 ORTHO05D000227 2.9e-06 55.8 144 34.7
DCAR_003957 Daucus carota HOM05D000355 ORTHO05D000227 2.9e-06 55.8 142 34.5
Hma1.2p1_0015F.1_g010590 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 2.9e-06 55.8 135 40.7
Manes.17G062700 Manihot esculenta HOM05D000355 ORTHO05D000227 2.9e-06 55.8 136 37.5
Nitab4.5_0003746g0020 Nicotiana tabacum HOM05D000355 ORTHO05D000227 2.9e-06 55.8 148 38.5
C04p63700 Brassica napus HOM05D000355 ORTHO05D000227 3.8e-06 55.5 144 36.1
Duzib235G1481 Durio zibethinus HOM05D000355 ORTHO05D000227 3.8e-06 55.5 156 35.3
Sc24g0001940 Simmondsia chinensis HOM05D000355 ORTHO05D000227 3.8e-06 55.5 95 44.2
BcaB03g13870 Brassica carinata HOM05D000355 ORTHO05D000227 5.0e-06 55.1 139 35.3
MELO3C007178.2 Cucumis melo HOM05D000355 ORTHO05D000227 5.0e-06 55.1 95 40.0
Sed0005577 Sechium edule HOM05D000355 ORTHO05D000227 6.5e-06 54.7 145 37.2
A07p10440 Brassica napus HOM05D000355 ORTHO05D000227 8.5e-06 54.3 144 34.7
Carub.0004s1599 Capsella rubella HOM05D000355 ORTHO05D000227 8.5e-06 54.3 149 36.2
Cfa021170 Carpinus fangiana HOM05D000355 ORTHO05D000227 8.5e-06 54.3 136 36.0
DCAR_007918 Daucus carota HOM05D000355 ORTHO05D000227 8.5e-06 54.3 139 37.4
Peaxi162Scf00308g00051 Petunia axillaris HOM05D000355 ORTHO05D000227 8.5e-06 54.3 147 38.8


User provided reference genes

Program Settings