Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 4.3e-283 977.2 471 100.0
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.4e-201 704.5 420 79.3
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.7e-200 702.2 446 76.0
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 5.6e-174 614.8 428 66.6
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 3.7e-173 612.1 441 69.4
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 9.0e-172 607.4 432 66.7
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 2.2e-170 602.8 436 64.9
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 3.8e-170 602.1 425 66.8
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 6.5e-170 601.3 438 64.6
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.9e-169 599.7 425 64.9
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.5e-169 598.2 425 65.9
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 7.9e-168 594.3 435 64.6
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.8e-167 593.2 433 64.0
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.8e-167 593.2 434 64.3
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.5e-166 589.3 428 64.5
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 3.3e-166 589.0 427 65.1
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.6e-165 586.6 436 64.7
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.2e-165 586.3 425 64.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 2.2e-165 586.3 425 64.5
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 2.0e-163 579.7 429 61.8
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.0e-163 579.7 411 65.5
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.6e-163 579.3 425 64.5
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 2.9e-162 575.9 425 64.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 5.0e-162 575.1 425 63.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 5.0e-162 575.1 428 62.9
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 1.1e-161 573.9 427 64.4
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 9.4e-161 570.9 424 63.2
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 9.4e-161 570.9 452 59.1
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 1.6e-160 570.1 427 63.7
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 2.7e-160 569.3 424 62.3
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 4.6e-160 568.5 396 65.9
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-159 567.0 428 63.3
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.4e-159 567.0 424 63.2
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 2.3e-159 566.2 426 63.4
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.9e-159 565.5 416 63.7
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 8.8e-159 564.3 415 64.3
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.9e-158 563.1 415 63.4
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 2.5e-158 562.8 424 61.6
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.3e-158 562.4 424 61.1
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.7e-158 561.6 423 62.9
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 9.7e-158 560.8 405 62.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 9.7e-158 560.8 425 62.4
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 2.8e-157 559.3 452 59.1
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.1e-156 557.4 403 62.3
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 3.1e-156 555.8 422 62.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 3.1e-156 555.8 450 60.7
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 6.9e-156 554.7 451 59.6
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 9.1e-156 554.3 441 60.3
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 9.1e-156 554.3 456 58.8
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 1.2e-155 553.9 427 62.3
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 1.2e-155 553.9 453 56.7
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.5e-155 553.5 425 60.9
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.0e-155 553.1 425 61.4
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 2.0e-155 553.1 456 59.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 3.4e-155 552.4 425 61.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 3.4e-155 552.4 451 59.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 5.9e-155 551.6 430 59.8
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 7.7e-155 551.2 451 59.0
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.0e-154 550.8 451 57.6
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.3e-154 550.4 459 59.3
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.7e-154 550.1 456 58.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.2e-154 549.7 406 63.3
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 5.0e-154 548.5 408 64.0
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 8.5e-154 547.7 426 61.7
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 7.9e-152 541.2 389 64.3
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.8e-151 540.0 445 57.3
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 2.2e-149 533.1 430 57.7
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.7e-144 516.2 460 56.7
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.6e-144 515.8 428 58.9
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.3e-143 513.1 436 57.1
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 9.7e-142 507.7 424 59.4
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.3e-141 507.3 425 57.9
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.8e-140 503.4 441 56.9
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.1e-140 502.3 400 59.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.2e-139 500.7 434 54.6
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 9.4e-137 491.1 437 53.5
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 4.4e-134 482.3 438 57.3
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.7e-133 480.3 397 56.9
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.9e-131 471.9 434 53.0
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 7.7e-131 471.5 450 50.9
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.5e-129 467.2 396 53.8
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.2e-128 464.2 438 54.8
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 3.6e-128 462.6 316 64.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 7.5e-126 454.9 356 62.4
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 6.3e-125 451.8 335 64.8
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.0e-122 444.5 419 48.7
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 3.3e-121 439.5 359 60.4
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.7e-120 435.6 417 53.5
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 5.7e-118 428.7 337 59.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.7e-117 426.0 398 53.5
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.8e-116 423.7 337 59.9
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.4e-116 423.3 421 48.5
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-112 411.0 383 53.8
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.2e-94 351.3 225 69.8
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 9.9e-86 321.6 245 61.6
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.9e-77 293.5 237 59.5
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.2e-67 261.5 197 60.9
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-65 254.6 216 56.9
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.4e-55 220.7 435 33.1
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.7e-50 202.6 130 70.8
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 6.7e-50 202.6 130 70.8
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 5.5e-44 183.0 346 32.9
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 3.0e-42 177.2 166 51.2
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.0e-33 147.9 179 45.3
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 9.1e-31 139.0 136 49.3
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-24 118.6 171 42.1
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-24 118.6 171 42.1
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.7e-24 118.2 70 77.1
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 4.1e-23 113.6 123 44.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.3e-21 108.6 63 76.2
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.5e-17 95.1 75 58.7
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 3.2e-12 77.4 211 30.3
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 9.4e-12 75.9 194 30.4
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.2e-11 75.5 212 28.3
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.6e-11 73.9 92 43.5
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 6.3e-08 63.2 77 39.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.5e-06 57.4 77 39.0


User provided reference genes

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