Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 0.0e+00 2123.6 1059 100.0
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 0.0e+00 1321.6 1178 59.3
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 0.0e+00 1298.1 1002 65.0
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 0.0e+00 1198.7 1047 59.9
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 2.5e-302 1042.3 1027 53.6
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 3.0e-268 929.1 1092 48.1
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 7.6e-235 818.1 1103 42.5
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.3e-231 806.6 1103 43.0
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 3.9e-231 805.8 1106 43.2
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 3.3e-230 802.7 1113 42.2
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 4.3e-230 802.4 1101 43.4
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 4.7e-229 798.9 1107 43.2
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 1.2e-227 794.3 1106 42.2
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 2.0e-227 793.5 1089 42.9
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 7.6e-227 791.6 1076 43.0
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 1.7e-226 790.4 1103 42.7
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.8e-220 770.4 1107 41.6
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 4.0e-220 769.2 1120 40.7
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 4.5e-219 765.8 1109 42.5
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 9.9e-219 764.6 1105 41.8
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 3.8e-218 762.7 1060 41.4
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 6.4e-218 761.9 1109 41.6
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 6.4e-218 761.9 1115 41.1
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 1.9e-217 760.4 1102 41.7
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.9e-217 760.4 1103 41.6
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 4.2e-217 759.2 1104 40.7
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 2.3e-215 753.4 1074 42.0
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 1.5e-214 750.7 1112 39.8
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 1.2e-211 741.1 1106 40.6
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 4.5e-211 739.2 1073 40.0
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 1.7e-210 737.3 1074 40.8
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 2.2e-210 736.9 1077 40.9
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 2.9e-210 736.5 1100 40.4
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 3.8e-210 736.1 1141 39.3
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 2.4e-209 733.4 1117 39.2
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 3.2e-209 733.0 1079 40.6
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.8e-207 727.2 1104 40.1
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 3.3e-206 723.0 1098 39.8
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 8.2e-205 718.4 1111 39.2
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 8.2e-205 718.4 1047 41.5
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 1.2e-203 714.5 1094 38.8
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 2.9e-202 709.9 1096 38.9
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 6.5e-202 708.8 1097 37.6
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.1e-201 708.0 1088 39.2
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 7.1e-201 705.3 1099 38.4
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 3.5e-200 703.0 1058 39.6
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 2.4e-196 690.3 1110 37.9
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 7.6e-195 685.3 1121 38.3
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 1.4e-193 681.0 1084 37.5
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 2.5e-193 680.2 1093 37.7
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 4.3e-190 669.5 1097 38.4
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 4.3e-190 669.5 1082 38.0
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 1.3e-189 667.9 1083 38.0
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 1.7e-189 667.5 1012 40.8
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 1.5e-187 661.0 1094 37.0
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 1.1e-185 654.8 1094 36.7
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 4.2e-185 652.9 1090 36.2
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 1.6e-184 651.0 1098 36.6
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 6.1e-184 649.0 1150 36.4
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 1.0e-183 648.3 1093 36.5
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 2.0e-182 644.0 1096 36.3
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 4.4e-182 642.9 1057 37.8
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 2.8e-181 640.2 1076 36.4
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 3.7e-181 639.8 1095 36.5
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 8.2e-181 638.6 1422 32.8
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 5.3e-180 636.0 1166 35.7
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 5.3e-180 636.0 880 41.8
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 2.9e-178 630.2 1175 35.7
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 5.5e-177 625.9 1079 36.1
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 9.4e-177 625.2 901 41.1
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 1.6e-171 607.8 1089 35.4
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 9.4e-169 598.6 860 41.3
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 4.4e-166 589.7 892 40.8
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 2.8e-165 587.0 784 43.9
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 1.6e-155 554.7 938 36.4
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 1.7e-154 551.2 1183 31.8
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 2.3e-154 550.8 916 37.4
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.7e-149 534.6 769 40.8
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 1.0e-138 498.8 866 35.6
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 3.3e-137 493.8 866 35.0
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 3.9e-130 470.3 784 38.4
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 4.0e-127 460.3 1025 31.8
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 4.4e-126 456.8 800 36.9
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 2.1e-120 438.0 846 35.7
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 1.2e-118 432.2 1264 28.2
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 9.2e-116 422.5 793 35.8
Dinv11710 Davidia involucrata HOM05D005682 ORTHO05D007050 9.9e-110 402.5 495 43.6
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 8.4e-109 399.4 730 35.6
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 2.7e-107 394.4 512 45.7
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 8.7e-106 389.4 494 43.3
Hma1.2p1_0499F.1_g166820 Hydrangea macrophylla HOM05D005682 ORTHO05D007050 6.2e-104 383.3 473 44.6
CDE04G1407 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 1.1e-95 355.9 741 35.4
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 4.0e-95 354.0 606 35.3
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 2.2e-93 348.2 702 32.6
COL.COLO4_08120 Corchorus olitorius HOM05D005682 ORTHO05D007050 8.7e-90 336.3 688 34.7
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 8.7e-90 336.3 799 31.0
HPP92_008567 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.8e-87 328.6 531 38.6
Os10g0485100 Oryza sativa ssp. japonica HOM05D005682 ORTHO05D007050 5.5e-84 317.0 531 36.5
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 1.5e-81 308.9 1148 25.7
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 6.5e-77 293.5 500 38.8
SHI13893 Sapria himalayana HOM05D005682 ORTHO05D007050 1.7e-72 278.9 514 34.8
CSS0031646 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 1.7e-69 268.9 356 43.5
BcaC05g28417 Brassica carinata HOM05D005682 ORTHO05D007050 2.5e-68 265.0 455 36.0
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 1.2e-59 236.1 390 35.1
CSS0028316 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 8.2e-56 223.4 274 44.2
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 4.2e-52 211.1 291 40.2
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 1.2e-49 203.0 345 36.5
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 2.7e-46 191.8 251 39.8
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 1.0e-42 179.9 171 52.0
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 1.4e-42 179.5 187 49.2
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 1.8e-42 179.1 187 49.2
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 2.6e-41 175.3 305 34.1
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 5.7e-41 174.1 1061 22.7
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 2.0e-38 165.6 201 43.3
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 3.8e-37 161.4 1015 21.7
Cc11_g00100 Coffea canephora HOM05D005682 ORTHO05D007050 4.2e-36 157.9 157 48.4
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 1.8e-34 152.5 198 39.4
Nitab4.5_0002392g0030 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.2e-33 149.8 155 47.1
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 8.3e-32 143.7 244 36.1
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.6e-30 139.4 194 42.8
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 3.6e-27 128.3 124 51.6
SHI13892 Sapria himalayana HOM05D005682 ORTHO05D007050 4.7e-27 127.9 151 44.4
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 8.6e-21 107.1 130 44.6
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 4.7e-19 101.3 90 53.3
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 2.7e-14 85.5 160 30.0
BcaC05g28408 Brassica carinata HOM05D005682 ORTHO05D007050 1.1e-12 80.1 149 34.9
Psat4g043640 Pisum sativum HOM05D005682 ORTHO05D007050 1.1e-12 80.1 98 43.9
SMO141G0017 Selaginella moellendorffii HOM05D002497 ORTHO05D002697 3.6e-11 75.1 151 33.1
HPP92_008566 Vanilla planifolia HOM05D005682 ORTHO05D007050 4.7e-11 74.7 192 30.7
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.3e-10 72.4 103 40.8
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 3.1e-10 72.0 138 26.8
Os05g0420200 Oryza sativa ssp. japonica HOM05D002497 ORTHO05D002697 1.3e-08 66.6 149 32.2
Lsat_1_v5_gn_1_25241 Lactuca sativa HOM05D002497 ORTHO05D002697 3.7e-08 65.1 149 32.2
Mapoly0072s0055 Marchantia polymorpha HOM05D002497 ORTHO05D002697 6.4e-08 64.3 149 32.2
SEGI_17937 Sequoiadendron giganteum HOM05D002497 ORTHO05D002697 1.1e-07 63.5 139 31.7
Os01g0886000 Oryza sativa ssp. japonica HOM05D002497 ORTHO05D002697 1.4e-07 63.2 154 31.8
TWI18G0057 Tripterygium wilfordii HOM05D002497 ORTHO05D002697 1.4e-07 63.2 223 29.6
Zm00001eb366020 Zea mays HOM05D002497 ORTHO05D002697 1.4e-07 63.2 154 33.1
ECA247G3374 Erigeron canadensis HOM05D002497 ORTHO05D002697 2.4e-07 62.4 154 32.5
vmacro00923 Vaccinium macrocarpon HOM05D002497 ORTHO05D002697 4.1e-07 61.6 234 28.2
vmacro22751 Vaccinium macrocarpon HOM05D002497 ORTHO05D002697 4.1e-07 61.6 234 28.2
HanXRQChr02g0037051 Helianthus annuus HOM05D002497 ORTHO05D002697 1.6e-06 59.7 154 31.2
ATR1089G083 Amborella trichopoda HOM05D002497 ORTHO05D002697 2.1e-06 59.3 150 30.0
Rhsim12G0004500 Rhododendron simsii HOM05D002497 ORTHO05D002697 2.1e-06 59.3 156 30.1
TWI12G0191 Tripterygium wilfordii HOM05D002497 ORTHO05D002697 2.7e-06 58.9 218 28.0
Hma1.2p1_0004F.1_g003840 Hydrangea macrophylla HOM05D002497 ORTHO05D002697 3.5e-06 58.5 149 29.5
Sopen11g028120 Solanum pennellii HOM05D000847 ORTHO05D003278 3.5e-06 58.5 212 24.5
Solyc11g069400.2 Solanum lycopersicum HOM05D000847 ORTHO05D003278 6.0e-06 57.8 208 25.0


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