Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 3.5e-233 811.2 399 100.0
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 4.6e-193 677.9 399 83.0
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 8.4e-187 657.1 376 85.1
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.1e-186 656.8 399 81.7
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 5.7e-175 617.8 399 76.4
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 2.0e-172 609.4 403 73.2
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.0e-171 607.1 402 73.4
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.7e-171 606.3 362 79.3
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 2.2e-171 605.9 399 75.4
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 8.4e-171 604.0 407 72.5
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 8.4e-171 604.0 378 77.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 3.2e-170 602.1 376 78.2
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 7.1e-170 600.9 381 76.4
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.5e-169 598.6 400 74.0
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 7.9e-169 597.4 347 81.8
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.0e-168 597.0 382 76.4
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 2.3e-168 595.9 400 72.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 5.1e-168 594.7 347 80.4
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 1.9e-167 592.8 396 73.5
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 3.3e-167 592.0 353 79.6
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 3.3e-167 592.0 407 72.2
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 7.4e-167 590.9 401 72.3
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 9.7e-167 590.5 347 81.0
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 9.7e-167 590.5 403 73.0
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 9.7e-167 590.5 388 74.5
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 1.6e-166 589.7 400 71.5
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 2.2e-166 589.3 355 79.2
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 2.8e-166 589.0 352 79.8
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.8e-166 589.0 400 72.5
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.8e-166 589.0 373 76.4
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 6.3e-166 587.8 353 78.8
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 6.3e-166 587.8 397 72.5
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 6.3e-166 587.8 365 76.2
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.8e-165 586.3 407 72.0
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 3.1e-165 585.5 350 79.4
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 3.1e-165 585.5 390 72.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 4.1e-165 585.1 353 79.9
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 4.1e-165 585.1 352 79.0
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.2e-164 583.6 363 76.0
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 2.0e-164 582.8 350 78.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 2.0e-164 582.8 380 73.2
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.6e-164 582.4 350 79.1
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 2.6e-164 582.4 402 71.9
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.7e-164 580.9 369 75.3
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 7.7e-164 580.9 390 71.8
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.7e-163 579.7 372 75.3
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.2e-163 579.3 347 79.5
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 2.2e-163 579.3 353 77.6
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 2.9e-163 578.9 377 74.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 5.0e-163 578.2 368 75.3
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 6.5e-163 577.8 392 70.9
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.1e-162 577.0 350 78.6
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.4e-162 576.6 348 77.9
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 1.9e-162 576.2 382 74.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.9e-162 576.2 350 78.6
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.5e-162 575.9 355 77.2
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 3.2e-162 575.5 363 75.5
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.2e-161 573.5 357 77.9
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 1.2e-161 573.5 362 76.0
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.2e-161 573.5 338 80.5
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.2e-161 573.5 379 74.4
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.2e-161 573.5 347 78.1
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.6e-161 573.2 353 76.8
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.1e-161 572.8 348 78.4
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.6e-161 572.0 379 74.9
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 3.6e-161 572.0 402 70.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 4.6e-161 571.6 337 80.4
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.6e-161 571.6 346 78.3
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 6.1e-161 571.2 358 76.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.4e-160 570.1 355 76.9
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 1.8e-160 569.7 337 79.5
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.8e-160 569.7 352 77.0
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 3.0e-160 568.9 347 78.4
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.0e-160 568.9 403 71.5
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.0e-160 568.9 354 76.3
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 3.9e-160 568.5 388 70.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 5.1e-160 568.2 348 77.6
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 6.7e-160 567.8 360 76.4
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.1e-159 567.0 357 76.5
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 1.1e-159 567.0 357 76.2
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.5e-159 566.6 363 74.7
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 2.0e-159 566.2 357 75.6
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 3.3e-159 565.5 357 76.5
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 4.3e-159 565.1 357 75.6
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.7e-158 562.0 351 77.2
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 4.8e-158 561.6 386 71.2
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 4.8e-158 561.6 327 81.3
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 6.3e-158 561.2 352 74.7
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.1e-157 560.5 358 76.0
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.1e-157 560.5 416 67.8
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.5e-156 556.6 319 81.8
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 5.9e-156 554.7 350 75.4
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 2.2e-155 552.7 353 73.9
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.5e-154 549.3 346 74.3
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 9.4e-154 547.4 410 68.3
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 7.9e-153 544.3 348 74.4
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 2.7e-145 519.2 350 72.9
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 3.6e-145 518.8 350 72.9
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 3.8e-139 498.8 330 72.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 7.2e-138 494.6 399 64.7
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 6.1e-137 491.5 389 64.3
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 1.0e-136 490.7 330 70.6
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 4.0e-136 488.8 330 70.9
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 6.3e-134 481.5 330 68.8
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 6.3e-134 481.5 338 69.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.6e-127 459.5 386 61.4
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 2.8e-126 456.1 285 78.6
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 5.4e-125 451.8 329 65.0
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.0e-123 445.3 378 61.4
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 7.2e-122 441.4 348 64.7
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 7.0e-117 424.9 376 58.0
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.5e-114 416.4 269 74.3
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.3e-110 404.1 266 72.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.2e-110 403.3 296 67.9
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 3.9e-107 392.5 252 73.8
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.9e-106 390.2 339 55.8
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.3e-99 367.5 327 57.5
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.6e-97 359.4 371 50.1
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 7.1e-69 265.4 172 72.7
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.7e-68 263.5 287 46.0
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-62 244.6 190 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.5e-61 239.2 182 63.2
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 4.6e-52 209.5 195 54.9
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.7e-46 191.0 131 73.3
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 6.5e-14 82.8 90 50.0
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 6.5e-14 82.8 90 50.0
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 1.1e-13 82.0 123 42.3
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 2.2e-09 67.8 35 85.7


User provided reference genes

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