Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1990.7 1065 100.0
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1700.6 1087 82.1
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1661.7 1205 75.9
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1627.1 1086 79.7
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1523.5 928 85.1
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1473.0 1084 73.7
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1425.6 1074 70.0
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1406.3 1072 68.5
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1397.5 1082 69.6
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1371.3 1093 67.2
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1369.0 1086 66.3
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1359.4 1084 67.8
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1358.2 1059 67.8
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1354.3 1084 66.5
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1352.0 1083 65.7
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1351.7 1095 67.6
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1349.7 1093 66.7
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1348.6 1079 66.2
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1348.6 1078 66.8
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1348.6 1078 66.0
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1344.7 1086 66.0
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1344.3 1086 66.5
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1338.9 1077 67.1
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1338.6 1088 67.1
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1337.4 1104 66.3
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1337.0 1078 66.0
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1333.5 1107 65.5
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1331.6 1073 66.9
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1330.9 1079 65.6
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1329.3 1088 66.7
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1327.0 1085 65.7
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1327.0 1085 65.7
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1325.1 1081 66.5
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1318.9 1075 65.2
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1318.1 1086 66.4
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1317.4 1074 65.7
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1315.4 1073 65.3
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1313.9 1086 65.0
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1308.5 1088 65.1
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1306.6 1045 65.6
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1304.3 1088 64.6
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1303.1 1072 65.0
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1302.0 1098 65.1
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1300.8 1085 64.6
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1298.5 1081 63.8
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1297.7 1047 67.2
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1297.3 1088 64.3
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1296.6 1043 67.2
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1295.8 1052 66.0
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1295.8 1113 63.0
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1295.4 1085 65.3
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1294.6 979 67.8
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 870 73.1
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 1085 65.3
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 868 73.8
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1293.5 1068 65.6
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1293.1 870 73.1
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1291.6 870 73.0
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1290.0 1071 65.5
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1288.9 1088 63.9
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1286.9 1070 65.2
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1284.6 1072 64.1
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1284.2 928 69.3
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1281.9 1088 65.7
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1281.2 1072 63.5
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1280.4 1108 62.1
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1279.6 1104 64.1
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1277.7 954 67.4
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1276.2 1090 63.1
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1273.8 1084 64.7
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1271.9 955 66.8
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1270.0 955 67.3
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1260.7 955 66.5
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1260.4 1088 63.6
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1253.8 988 65.7
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1251.1 1050 64.2
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1248.4 1076 62.4
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1237.2 955 65.7
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1237.2 955 65.7
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1236.9 1108 60.6
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1236.1 955 65.5
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1236.1 955 65.5
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1235.7 1192 58.4
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1235.3 870 70.8
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1225.3 1066 62.0
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1216.4 932 65.8
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1215.3 1113 61.9
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1213.0 1051 62.9
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1210.3 1104 60.2
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1208.4 1065 63.0
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1187.6 1119 60.2
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1181.8 1241 55.3
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1168.3 1077 60.3
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1164.4 900 66.4
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1158.7 942 61.6
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1156.4 1083 60.8
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1156.0 1032 62.8
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1121.7 1072 56.2
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1085.9 881 61.4
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 1.1e-310 1070.1 927 59.2
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 4.1e-281 971.8 693 70.6
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 7.0e-281 971.1 1083 50.2
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 1.2e-280 970.3 690 70.6
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 4.7e-277 958.4 1034 54.0
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 4.0e-252 875.5 745 58.3
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 7.1e-249 864.8 628 69.4
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.1e-245 853.2 546 76.7
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.1e-241 840.9 683 64.1
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.9e-225 786.9 633 62.9
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.6e-171 607.8 550 56.5
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 5.2e-151 539.7 445 62.0
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.5e-145 521.5 516 61.0
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 2.6e-134 484.2 318 76.4
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.9e-121 441.4 432 56.2
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 1.0e-109 402.5 368 54.9
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 5.0e-101 373.6 404 59.2
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 1.6e-96 358.6 391 58.8
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 8.2e-88 329.7 238 67.6
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 3.1e-87 327.8 276 60.9
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 2.2e-85 321.6 233 67.0
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 1.7e-80 305.4 1043 26.7
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 8.5e-77 293.1 321 52.6
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 1.3e-72 279.3 1081 25.1
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 1.8e-63 248.8 197 64.0
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 8.8e-58 229.9 134 82.1
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 1.8e-55 222.2 190 58.9
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.6e-46 192.6 389 33.7
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 4.0e-42 177.9 101 87.1
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 4.4e-41 174.5 217 45.6
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.7e-38 165.2 144 59.0
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 1.3e-37 162.9 99 75.8
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 8.6e-37 160.2 108 71.3
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 1.5e-36 159.5 103 72.8
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 1.9e-36 159.1 121 64.5
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.6e-35 156.0 225 36.9
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.7e-32 146.0 119 58.8
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 2.4e-31 142.1 164 46.3
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 1.6e-30 139.4 237 38.8
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.7e-30 138.7 93 75.3
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.0e-30 137.5 149 50.3
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 6.2e-27 127.5 241 36.9
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 8.1e-27 127.1 108 61.1
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 8.1e-27 127.1 108 61.1
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 8.1e-27 127.1 108 61.1
AUR62025190 Chenopodium quinoa HOM05D003881 ORTHO05D004343 3.8e-24 118.2 111 60.4
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 1.4e-23 116.3 83 66.3
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 2.7e-22 112.1 86 66.3
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 3.5e-22 111.7 66 75.8
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 3.0e-21 108.6 61 80.3
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.0e-21 108.6 89 65.2
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 3.6e-19 101.7 97 63.9
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.1e-18 100.1 59 79.7
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 6.9e-18 97.4 151 41.7
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 6.9e-18 97.4 61 67.2
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.5e-17 96.3 67 68.7
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 4.4e-17 94.7 151 41.1
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.4e-17 94.7 79 63.3
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 1.4e-15 89.7 272 32.7
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 7.1e-15 87.4 51 78.4
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 9.3e-15 87.0 47 91.5
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.6e-14 86.3 79 53.2
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.6e-14 84.7 116 46.6
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.8e-11 75.5 135 35.6
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 5.3e-10 71.2 63 54.0
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 5.3e-10 71.2 161 33.5
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 2.0e-09 69.3 57 59.6
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 9.9e-09 67.0 79 41.8
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 1.9e-07 62.8 79 40.5
SEGI_25641 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.5e-06 58.5 37 73.0


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