Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g084710 Amaranthus hybridus HOM05D005951 ORTHO05D007025 4.4e-32 140.6 66 100.0
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 4.4e-08 60.8 46 65.2
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 5.8e-08 60.5 38 73.7
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 1.7e-07 58.9 37 75.7
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 2.2e-07 58.5 40 65.0
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.9e-07 58.2 48 60.4
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 2.9e-07 58.2 40 67.5
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 3.7e-07 57.8 43 62.8
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 6.4e-07 57.0 41 63.4
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 6.4e-07 57.0 40 65.0
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 6.4e-07 57.0 35 65.7
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 8.3e-07 56.6 40 65.0
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 8.3e-07 56.6 43 62.8
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 8.3e-07 56.6 32 75.0
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 8.3e-07 56.6 39 69.2
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 8.3e-07 56.6 39 69.2
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.1e-06 56.2 35 71.4
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 1.1e-06 56.2 37 70.3
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 1.4e-06 55.8 40 62.5
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 1.4e-06 55.8 40 62.5
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.4e-06 55.8 40 62.5
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 1.4e-06 55.8 40 62.5
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.4e-06 55.8 37 67.6
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 1.4e-06 55.8 46 58.7
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 1.9e-06 55.5 40 65.0
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.9e-06 55.5 37 70.3
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.9e-06 55.5 37 70.3
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 2.4e-06 55.1 35 68.6
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 2.4e-06 55.1 35 65.7
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 2.4e-06 55.1 32 75.0
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 2.4e-06 55.1 39 64.1
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.4e-06 55.1 32 75.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.4e-06 55.1 32 75.0
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 2.4e-06 55.1 32 75.0
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.4e-06 55.1 38 65.8
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 2.4e-06 55.1 32 78.1
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 3.2e-06 54.7 38 65.8
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 3.2e-06 54.7 41 63.4
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 3.2e-06 54.7 36 69.4
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 4.1e-06 54.3 38 68.4
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 4.1e-06 54.3 32 71.9
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 4.1e-06 54.3 37 70.3
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 5.4e-06 53.9 38 63.2
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 5.4e-06 53.9 38 63.2
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 5.4e-06 53.9 41 61.0
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 5.4e-06 53.9 42 59.5
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 5.4e-06 53.9 35 65.7
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 5.4e-06 53.9 44 56.8
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 7.0e-06 53.5 40 60.0
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 7.0e-06 53.5 40 60.0
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 7.0e-06 53.5 32 71.9
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 7.0e-06 53.5 35 65.7
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 9.2e-06 53.1 36 63.9
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 9.2e-06 53.1 40 60.0
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 9.2e-06 53.1 40 60.0
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 9.2e-06 53.1 32 71.9
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 9.2e-06 53.1 34 64.7
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 9.2e-06 53.1 42 61.9
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 9.2e-06 53.1 32 68.8
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 9.2e-06 53.1 38 63.2
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 9.2e-06 53.1 32 68.8


User provided reference genes

Program Settings